Oncorhynchus tshawytscha (Chinook salmon): 112258596
Help
Entry
112258596 CDS
T05605
Symbol
svilc
Name
(RefSeq) supervillin isoform X1
KO
K10369
supervillin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112258596 (svilc)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Gelsolin / villin
112258596 (svilc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gelsolin
VHP
DUF7904
Motif
Other DBs
NCBI-GeneID:
112258596
NCBI-ProteinID:
XP_042183293
LinkDB
All DBs
Position
LG09:complement(71772875..71809505)
Genome browser
AA seq
1708 aa
AA seq
DB search
MDTIENPDLEPRSERIARYKAERRRELQERYGNMEELPSKWVRRDGTLMNSDSTPPSTDR
TLSGGLNGRAGGPEGGRRDLHLESNTPLESEHRRFSNGFEADTAADPTYLQRKCSSDSAG
VLSGVEPLAPPGTPGPDAAQLQTRVSVGQLRCALLQQTGTGTQPEKVPDSGRAASSLDLA
VKPGSEGGRRRTRRYVPGVSGGGSKTNERFRTQPITACEVQESGGLLEAEEEENAKADVK
TDDRAKMSVAAKMSLFKELEKSAAPEASSFLKPRSGSVAYERRVRRGNEHRSLTQPITCE
EMVVATSTPQPAESGEAQAVQAEAEAVEDDENNKLTMSEKLALFNKLSLPGNLGDSAPHA
PPERRRQKGARYRTQPITVEEVSLLQKGPIRLPPLRLSPTLSDRQQEQSINLRPSEVRQA
QPRPGADVEPATGPDPSQQGQQQRRDSEPGEIRGILRNSASGAPVRDRDRDTMWEDRQQD
QDGGGERENEVEERRAERHDNVPVPCRERPASSAPWRQRNRNRRETVAVCSPARPSSEQG
HPQEERPSLAEHRKQMDPPGNISGRDRLSDASREEGEEEKWGRVRRDTPPRQHVQVTLAD
QEKEDNEISHDAPVVNPQCWVPVFSSVYSNSTPQYVMCYNQTSSSYEAQEVSSPTQVCSQ
PQWRQKQTRPVEAEELPQASVAERMRTLQDSEEQWKTRGRGAANDSAQYTVAGRMAKRGL
VTPVSDIDETPPSHTKRPSTGATATACPCEEISSHPGMEVEEDTKLDKLDSIVDRLNTAP
QDTPLEVTSVGEKEVMTPDDQETCGGFYREVSPHSPSALPAGAGAATGTDPEQDLSALCQ
TNTPMLTSEVAQHRRSVRPSRRTQGSRNPLRALAARDDIRQDFMGERITMATVNTNRTQV
EKSGLASTEDFSSVHLRDVTSTESVRNSNNLPISNLMLIHVKGWHHVQVRLVEPTARSLN
SGDCFLLVTPTHCILWSGEFANATEKAKASELASLIQTQGDLGCLACEVIHLEEGVNTDN
SLASDFWNLLGGKTQYRGAGAPEEDELYESGVVESNCLYRLVENRLVPHEQAWAAIPTVS
LLGSTEALVFDFGSEVYLWHGKDVAPGDRSVAVQLAQQVWGGPYDYSNCRVNPLDPTHCN
PSIQPQGERRPNWALFGCVSEHKETALFREKFLDWAADKEETAAMVVEEAQTAMPVWPQQ
SPLPQQQIECVSLCACDAKALVAGQGVALPGDGVVSTVLEGVNVQRGHGVVPLEDGRQVE
LSTVAVDTWHIQEFEDSEAQLESPGQLHEGDTYLIRWTYTLSPVDESGQPGRECSAVFIW
QGRHSSNNGRGASALRSHEGTQVMVPQGQEPPCFLQLFQGGLVIHKGCRADTTNNTGVWR
LFCVRGELPEEASLLEVDCSCGGLRSRGSLILLNSQQGALYLWYGCKVHASSREAGKRAV
ERLTQMCPPELGLSRDSLSRVQEVEEGAEPVEFWNAIGQQDRKTYDCMLQDPGKYNFTPR
LFHLSGRSGTFQGEELQSPARLPGVVMAMPFVQESLYFVPQPALFLLDNCMELYLWQAGE
PEDSQTTGSACIHWANERRCAMQTVLQYCKERNPRRPLQAYLIQDGVEPLTFTNVFPRWE
KRPTPTTQGEAGRVKLTLVQDALAQLSKTQYPLEELLQTPLPEGVDPQCLEIYLSDHDFQ
TILKMKRDEYDSLPNWKQVSLKKSKGLY
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggacactatcgagaaccccgacttggagcccagatcggagcggatcgcccgctacaag
gccgagaggaggcgggagctgcaagaacgctatggcaacatggaggagctcccatccaag
tgggtgaggagggatgggactctcatgaactcagacagcacacctccctccacagacagg
accctctctggggggttgaacggcagagcgggggggccggagggtggccggagggacctc
cacttggagagcaacacccctctggagtcagaacatcggagattctccaacggctttgag
gcagacaccgctgcagacccaacatacctccaaaggaagtgttcttctgactctgccggc
gtgttgagtggggtggagcccctagctcccccaggcacccctggacccgacgcggcccag
ctgcaaacgcgggtgtcggtgggccagttgaggtgtgccctgctgcagcagactgggact
ggaacacagcctgagaaagttcctgacagtggccgtgcagcctcttcccttgacctggct
gtaaagccgggctcggaggggggacggcggcgcacccgtcgctatgtccctggggtgtca
ggcgggggcagcaaaaccaacgagcgcttcaggacacagccgatcacagcctgtgaggtg
caggagagtggcgggctgctggaagcagaggaagaggagaacgctaaagctgatgtgaag
acagacgacagagccaagatgagtgtggcggccaagatgtctctgtttaaagagctagag
aagtcagcagcccctgaggcctcgtcctttctgaagcctcgctctggcagcgtcgcgtat
gaacgcagagtacgccgtggcaacgagcaccgctcactcactcagccaatcacctgtgag
gagatggtggtggccaccagcaccccccagccagcagagtcaggcgaggcccaggctgtg
caggccgaggcggaggcagtggaggacgatgagaacaataagctgactatgagcgagaag
ctggctctgttcaacaagctgtccctgccagggaacctgggggattccgctccccatgcc
cccccagagagacgcaggcagaagggggcgcgctaccgcacacagcccatcaccgtggag
gaggtcagcctgctccagaaaggccccatccgactgcccccgctgcgcctgtcccccacc
ctgtctgacaggcagcaggagcagtccatcaatctgaggcccagtgaggtgcgtcaggcc
cagcctcgacccggggccgatgtggagcctgccacaggacctgacccgtcccagcagggc
cagcagcagcgcagggactctgagccaggagagatcagaggcatcctgaggaacagcgcc
tctggagcaccagtacgggaccgagacagagacactatgtgggaggacagacagcaggac
caggacggaggaggggagagggagaacgaggtggaggagaggagggcagaaagacatgac
aatgtaccagtgccttgtagagagagaccagcctcctcggccccctggagacagaggaac
aggaacaggagggagacggtggccgtgtgtagcccagccaggccctcctcagagcagggt
cacccccaggaggagaggccttccctggctgaacatagaaagcagatggacccccctggg
aacatctctgggagagacaggctgtcagatgcttccagggaggagggagaggaggagaag
tggggcagggtgagaagagacactcctcccagacaacacgtccaggtgaccttggcggac
caggagaaggaagacaatgagatctcccatgatgcaccagtcgtcaaccctcagtgctgg
gttcctgtcttttcctctgtctattctaacagtacacctcaatatgtcatgtgctacaat
cagaccagctcttcctatgaggcccaggaggtctcctctcctacccaggtctgctctcag
ccccaatggagacagaagcagactagaccagtagaagcggaggagctgccacaggcgtcg
gtggctgagcgcatgagaacgctacaggacagcgaggagcagtggaagaccagagggaga
ggagccgccaacgactcagcccagtacactgtggccggacgcatggcgaaaagaggtttg
gtgacccctgtatcagacatagacgagacccctccatctcacactaagagaccctccaca
ggagccacagcaacagcatgcccatgtgaagagatctccagtcaccctgggatggaggtg
gaagaggacacaaagctggacaaactggattccattgtggacaggttgaatactgctccc
caggacacgcccctggaggtgacctcagtgggggagaaggaggtcatgacccctgatgac
caggagacatgtggtggtttctacagggaggtgtctccccactcaccctctgccctccct
gctggggctggagctgccactggaactgacccagaacaggacctgagtgccctctgccag
accaacacacccatgctaacatcagaagtggcgcagcacaggcggtcggtgcgtccgtcc
cgtaggacccagggctcccggaaccctctgcgtgctctggcggcccgcgatgacatcaga
caggacttcatgggagagagaatcacaatggctaccgtgaacactaacaggacacaagtg
gagaagtcaggtctggccagtacagaggacttcagtagtgtccacctgcgtgatgtcact
tccacagaatcagtgaggaacagcaacaacctgcccatcagcaacctcatgctcattcac
gtcaaaggttggcatcatgtgcaagtgcgtctggtggagcccacagccaggtctctgaac
agtggagactgcttcctgctggtcacacccactcactgcatcctctggagcggagagttc
gccaacgccacagagaaagccaaggcgtcagagctggcctcgttgatccagacacagggg
gacctgggctgcctggcctgtgaggtcatccacctagaggagggggtcaatactgacaac
agcctggcctctgacttctggaaccttctgggaggaaagacacaatacagaggagcggga
gccccagaagaggatgagctgtatgagagtggggtggtggagtctaactgtttgtacagg
ctggtggagaacagactggtaccccatgagcaggcctgggcagccatccctactgtctcc
ctactgggatccactgaggccctggtgtttgactttggcagcgaggtgtacctgtggcat
gggaaggatgttgcccctggtgacaggagtgtggctgtacagctggcccagcaggtgtgg
ggtggtccctacgactatagcaactgtagggtcaacccactggaccccacacactgcaac
cccagcatacagccgcaaggtgaaagacggcccaactgggccctgtttggctgtgtctct
gagcacaaggagacagccctcttcagggagaagtttctggactgggctgcagataaggag
gagacggctgcaatggtggtagaggaggcacagactgccatgccagtgtggccccagcag
agtcccctgccccagcagcagatagagtgtgtgtctctgtgtgcgtgcgatgccaaggcg
ctggtggcagggcagggggtggcgctgccaggggacggggtggtctctacagtcctggag
ggggtgaacgttcagagggggcatggggtcgtacccctggaggacgggcggcaggtggag
ctgagcactgttgccgtggatacctggcacattcaggagtttgaggacagcgaggctcag
ctggagagcccagggcagctgcatgaaggagacacgtacctgatccgctggacctatact
ctcagcccagtggatgaaagcgggcagcctgggagggagtgctctgctgtcttcatctgg
cagggccggcactctagtaacaatgggcgaggcgcgtctgcactcaggagtcatgaggga
acacaggtgatggtgcctcaggggcaggagcctccgtgtttccttcagctcttccaggga
ggtctggtcatccacaaaggctgccgagcggacaccaccaacaacacaggggtctggcgt
ctgttctgtgtgcgtggggagctgcctgaggaggccagtctgttggaggtggactgtagc
tgtggcggcctgcgctcccgaggttctctcatactgctcaacagtcaacagggggcgctc
tacctgtggtacggctgtaaggtccacgccagctcccgggaggcgggcaagagggctgtg
gagcgactcactcagatgtgccctcctgaactgggcctcagcagggatagcctttcgagg
gtgcaggaagtggaggaaggggcggagcctgtggagttctggaacgctattgggcagcag
gacaggaagacctatgactgcatgctgcaagatccagggaagtataacttcacgccacgc
ctcttccatctgagtggccgttccggaaccttccagggggaggagctgcagagccctgca
cggttgccaggggttgtcatggcgatgccctttgtccaggagagcctgtactttgtgcca
cagccagccctgttcctgctggataactgtatggagctgtatctgtggcaggcaggtgag
cctgaggacagtcagaccactggctcagcctgtatccactgggctaatgagaggaggtgt
gccatgcagacagtgctccagtactgcaaagagaggaacccgaggcgcccccttcaggcc
tacctcatccaggacggagtagaacccctcaccttcaccaacgttttccctcgctgggag
aagagacccacacccaccacacagggggaggccgggcgggtcaagctgaccttggtgcag
gacgccctggcccagctcagtaagacccagtaccccctagaggagctgctgcagacccct
ctgcccgagggagtggacccccagtgcctggagatatacctctccgaccacgacttccag
actattttgaagatgaagagagatgaatatgactccctcccaaactggaaacaagtcagc
ctgaaaaaaagcaaaggactctattga
DBGET
integrated database retrieval system
