Oncorhynchus tshawytscha (Chinook salmon): 112258744
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Entry
112258744 CDS
T05605
Name
(RefSeq) sterol regulatory element-binding protein 2
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112258744
04131 Membrane trafficking [BR:
otw04131
]
112258744
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
112258744
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112258744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
112258744
NCBI-ProteinID:
XP_042183490
LinkDB
All DBs
Position
LG09:79334037..79349105
Genome browser
AA seq
1084 aa
AA seq
DB search
MDSNVSGEYISTMENMDPTLSELGDEFTLGDIDEMLQFVSNQVGDFPDLFEDQMMQAIQP
QPQQQPTIQVHSQSIPMQTHSFPVHTLVQTHNQALPIQTQAQTVMITSSGGQSRFIQNPV
ICHQSPTTSFQVLQPQMQSIMTSPQVQPMTIQHQRLLQTGQTIQTLSTAPTVHTMQQQVQ
QVPLLVHQPQILKTENLVLTTLKPDGTQVLSTMQNPGITTLTHPIQTQTLQVPTLMGSNI
LTTVPVMMGGGDKLPIKQLSSGTSHCVGGNRQVMDHGMGMVMGPGGVMKEGERRTTHNII
EKRYRSSINDKILELRDLVMGGDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENLALKMNS
KNKSVVLSDDVEMKPEMLMMSPPASESGSGSPREFSPYCIDSEPGSPLLDHEQVKSEPGS
PSSVGVMDRSRLLLCALTFFCLSLNPLPSLLGSEAQSSSGLTSAHRASRTLFSLPSQTHN
FATWLWCLLPWLTVWILSGVGAVWGCVRVLYLWEPVTPLHSPKSVSFWRQRKQADLHLNR
GDYTAAVASLKTCLSVLTRALPTTSWDLLFSLSWNLVRYCLHHPTPLGWLVRQVGGKHKG
EESKTSSRDAALVYHRLSQLQLTGKLPQSSGLWALSLSMSAVNLSESAQSKMAPTQQAHI
YVTAATALRTVLGHHLSCLPGYLLSCAEGVASQSDSKPIPDCLHWLFTPLGRQFFLSCDW
SVKSESREGVYTSQRDPADPIAQLHRCFCEKLLERAVHSLIQPHTDTEADKPKNDSGEFS
SALEFLQLLNSCTEESSSPPFPAPPNHTTMPVADPVSRWWALVLKAAAHWLQGDDVAVRS
LLAEAERMPRALHTLDHPLPKAVLLLCKAVQMSLSPLKGEGAVACLSHCDRASSYLRTSI
SVPLSAQSGNWLNKGVELLVCDLLLTLRTSLWQRGSSSNGEPGPAPSSQLAGFQRDLSSL
RRLGQCYRQAQHKVFLHETTVRLMAGASPTRTHQLLEHSLRRRTNNPGYTTAEGDCVLGE
RERAHAILLACRHLPLPLLTPPGHRARLLAEAKRTLERVGDRRSLQDCQQILLRLSGGTT
IAAS
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaacgttagtggggagtacatctcgaccatggaaaatatggatccgactttg
tcagaactaggggacgaatttacactgggcgacatcgatgagatgctccagttcgtcagc
aaccaggtgggggacttccctgacctctttgaggaccagatgatgcaggccatccagccc
cagccccagcagcaacccaccatccaggtccacagccagagcatccccatgcagacacat
agcttccctgtgcacaccctggtccagacccacaaccaggctctgcccatccagacacag
gcccagacggtgatgatcacatccagtggcggccagtcccgcttcatccagaaccctgtc
atctgccaccagagtcccactacaagcttccaagtcctccaaccgcagatgcagagcata
atgacatcaccacaggttcaacccatgactatccagcaccagagactactgcagactggc
cagaccatccagactctctccaccgcgccaacagtccacaccatgcaacagcaggttcaa
caggtaccccttctggtccaccagcctcagattctgaagaccgagaatctggttctgacc
accctgaaacctgatgggacacaggttctgtccaccatgcagaaccctgggatcaccacc
ttgacccatcctatccagacacagactctacaggtaccgactctgatgggtagtaacatc
ctgaccactgtgcctgtcatgatggggggcggagacaagctgcccatcaaacagctgtcg
tcaggcacctcccactgtgtaggtgggaacaggcaggtgatggaccacgggatgggaatg
gtgatgggtccagggggggtgatgaaggagggggagaggagaaccacccacaacatcatc
gagaagaggtaccgctcctccatcaatgacaagatcctggagctgagagacctggtcatg
ggcggcgacgccaagatgcacaagtcaggagtgctgaggaaagccatcgactacatcaaa
tacctgcagcaggtcaaccacaaactacggcaggagaacctggccctcaagatgaacagc
aagaacaagtcagtggtgctgtctgacgatgtggagatgaaaccagagatgctgatgatg
tcacctccagcctcagagtctggatcaggatctcctcgtgagttctctccatactgcatc
gactccgagcctggcagtcccttactggaccatgagcaggtgaagagtgagcctggctca
ccctcttccgtgggagtgatggatcgctctcgtctcctcctctgtgccctcaccttcttc
tgcctctccctcaaccccctgccctctctcctgggatctgaggcccagagcagctctggc
ttgacctctgcacacagagcctccaggacactgttctcattacccagccagacccacaac
tttgcgacctggctttggtgcctgttgccatggttgacggtgtggattttgagcggtgtt
ggggcagtgtggggctgtgttagggtcctctacctctgggagcctgtcacccccctccac
tcgcccaaatcagtctccttctggaggcagcgtaaacaagcagacctacatctcaacaga
ggtgactatacagcagccgtggccagtttgaaaacctgcctgtcagtcttgaccagagcc
ctgcccaccaccagttgggacctcctcttctccctctcctggaacctagttcgctactgt
ctgcatcaccccacccctctgggctggctggttcgccaggttggtgggaagcacaagggg
gaggagtccaagaccagctcccgggacgcagctctggtctaccataggctgagccagctg
caactcacagggaagcttccccaaagcagtggcctgtgggctctgtctctgtctatgagt
gccgtcaacctcagtgagagtgcccaaagcaagatggcccccacccagcaggcccatatc
tatgtcaccgcggcaacagctttgcgcactgtactgggccaccacctctcctgcctgcct
ggttaccttttgagctgtgctgagggtgtggccagccaatcagactccaagcccatccct
gactgtctgcactggctcttcactccattgggcaggcagttcttcctcagctgtgattgg
tctgtgaagtctgagagcagagagggcgtgtacacttcccagagagacccagctgacccc
atcgcccagctccatcgttgtttctgtgagaagctgctggagagagctgtgcactccctc
atccagccccacactgacacggaggcagacaagcccaagaacgactcgggggagttctcc
agtgccttggagtttctccagctattgaacagctgcacagaggagtcctcctcacctccc
ttcccagccccacctaatcacaccaccatgccagtggcagacccagtgagtcgctggtgg
gcattggtcctaaaggctgctgcccattggctgcaaggagatgatgtcgctgtgaggtcg
ctgctggcagaggcagagcgcatgcccagagcgctccataccctcgatcatccgttgccc
aaggctgtgctgctgctgtgtaaggcggtgcagatgagcctgtctcctctgaagggagag
ggggcggtggcctgtctgtctcactgcgacagggccagcagctacctgcgcaccagcatc
tctgttcccctgtccgcccagtctggcaactggctcaacaagggggtggagctcctggtc
tgtgacctcttgctgaccctcaggaccagcctatggcaaagaggaagcagcagcaatggg
gagccaggccccgcccctagctcccaattggctggattccagcgggacctgagttcgttg
cgaaggctgggccaatgctacagacaggcacaacacaaggtgttcctgcatgagaccaca
gtgaggctgatggctggagccagtcccacccgtacacaccagctactggagcacagcctc
cgacgcaggaccaacaaccctggatacaccacggctgagggtgactgtgttctgggtgag
cgtgaaagggctcatgctatcctgctggcgtgccgccacctacccttacccctgctgacc
ccaccagggcaccgcgcccgcctgctggccgaggccaagcgcacccttgagcgtgtgggc
gaccgccgctccctacaggactgccagcagatcctgctccgcctcagcgggggcaccacc
atcgcggcctcctga
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