Oncorhynchus tshawytscha (Chinook salmon): 112258770
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Entry
112258770 CDS
T05605
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112258770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112258770
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
GGA
112258770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
Hrs_helical
Mac
Elf4
YgaB
Motif
Other DBs
NCBI-GeneID:
112258770
NCBI-ProteinID:
XP_024289094
LinkDB
All DBs
Position
LG09:complement(79152867..79161361)
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AA seq
687 aa
AA seq
DB search
MRQCQLPSSTHRCRGGEKGCSQSCSSRDTFMVKRIPVVMAAPPDTGSLEARINKATNPLN
RDTDWDSIQAFCDQLNNDLEGPQLATRLLAHKIQSPQEWEAMQALVVLETCMKSCGERFH
SEVGKFRFLNELIKVVSPKYLGSRAPEPVKKKVLELIYSWTLGLPDEAKIADAYEMLKKQ
GIVKQDPVLPADKLLLLPPPRPKNAIFEDEEKSKTLTRLLNSTQPEDLKAANKLIQEMVQ
EDQKQAEKLSKRVNAIQDVNESVSLLTQLLEDYDWTTNPQSNAELIQDLYQRCEKMRPTL
FRLASDTEDNDEALAEILQANDSLTQVINLYRQQVKGEVVNGNNSANTQRLTGSSVALLD
LSGLDTSPPSPEFPTPTDSLNAPSQEMGISLLDDELMSLGLSEGTPHTSNPASQPEDSTT
WDSFQSSDSVDIPDIPAAPSVLLSPDPLPYTQPLSTGATSGSSALDELDQLGKTLLQQSL
PPEGLQVKWDKPPFKPTLRDLQNKSGTNPSLIPAFSPEHPVALLGDRLLDTSPVHTVIPP
IEMILTDVFVPLESIKPSSLLPVTVFDSHSLRVLFHFARDSLPSLADVLVVIISMLSSAP
VPVSNILFQAFVPDTMRVKLQPPSETELPAFNPILPPAAITQILLLANPHKEKVQLQYKL
TFTLGEEDHDERGVVAQFPPSDTWGNL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtgccagctgccatcatctacccatcgctgtcggggaggtgagaaagggtgc
tctcaaagttgttcctcgcgagacacgttcatggtaaagagaattcccgtagtgatggcg
gcgccgcctgacacgggcagtttggaggcacgtatcaacaaggccacaaacccactaaac
agagatacagattgggacagcatccaggccttctgtgaccagctcaacaatgatttggag
ggaccccagctggccaccaggctactggctcacaagatccaatcccctcaggagtgggag
gccatgcaggcactcgtggtgctggagacgtgcatgaagagctgtggggaaaggttccac
agtgaggtgggcaagtttcgcttcctcaacgagctcatcaaagtggtctctccaaagtac
ctcggcagccgggctccagagccagtgaagaagaaggtgttggagctcatctatagttgg
acactggggctgcctgacgaggcaaagatcgctgatgcctacgagatgcttaaaaaacag
ggcattgtcaaacaggacccagttcttccagctgacaaactcctcctgcttccacctccg
agaccaaaaaatgccatatttgaggatgaggagaagtcaaagacactgactcgcctgttg
aacagcactcaacctgaggacctgaaagcagccaacaaactgatccaggaaatggtgcag
gaggaccagaagcaggcagagaagttgtccaagcgtgtgaacgccatccaggatgtgaat
gagagtgtcagcctactgactcagctgctggaggactatgactggaccaccaacccacag
agcaatgcagagctcatccaggacttgtaccagcgctgtgagaagatgagacccacattg
ttcagactggccagtgatacagaggacaatgatgaggctctggcggagatcctccaggcc
aacgatagcctgactcaggtcatcaacctgtacaggcagcaggtgaagggagaggtggtg
aacgggaacaactcagctaatacacaaaggctcacaggaagtagtgtggcgctacttgat
ctatcgggattggacacgtcacctccgtcaccagaattccccactccaacagacagccta
aatgctccctcccaggagatgggcatcagtctccttgatgatgagctaatgtcactgggt
ttgagtgaggggaccccccacacctccaacccggcctcccagcctgaggactctaccacc
tgggactctttccagtcttccgacagtgtggatattcctgatatcccagctgcgcctagt
gtactactgagtccagatccgctcccctacacccagcctctttctactggagccacgtct
ggaagctcagccttagatgagttggatcagctggggaagacactgctgcagcagtcccta
cctccagagggcctgcaggtcaaatgggacaagcctccgttcaaacctactctacgagat
ctccagaacaaatctggaactaatccaagtcttatcccggccttctcccctgagcacccg
gtggctctcctcggtgataggttgttggacacctctccggttcacacagtcattccccct
atagaaatgatcctgacagatgtttttgtgccgcttgagtccattaagcccagcagcctg
ttgcctgtgacggtgtttgatagccacagtttgcgggtgctcttccactttgcacgtgac
tctctgccctctcttgctgatgtgctggtggtgatcatctccatgctctcctctgccccg
gttccagtcagcaacatcctcttccaggcctttgtccctgacacaatgagagtgaagcta
cagcccccatcagaaacagagcttccagccttcaacccaatcctcccacctgctgccatc
acacagatcctgctgctggccaaccctcacaaggagaaggtgcagttgcaatacaagcta
accttcacgctaggagaggaagaccatgatgaaagaggagttgtagcacagtttccacct
tcagacacatggggcaatctttaa
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