Oncorhynchus tshawytscha (Chinook salmon): 112258776
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Entry
112258776 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 12 isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112258776
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112258776
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
WW
Glyco_hyd_101C
PH
SH3_1
PH_9
Motif
Other DBs
NCBI-GeneID:
112258776
NCBI-ProteinID:
XP_024289108
LinkDB
All DBs
Position
LG09:78064550..78111826
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AA seq
1077 aa
AA seq
DB search
MSSLVCNMGLVLVEFEYEYTGRDGGLVSIKPNERYILLAKTNDHWWHVRKNELARPFYIP
AKYVKELPAEFPSPLDFADPPSPDLVPVPEPVPVPVPKHSVPDRAETRAGDEVTIRLRSP
KRHQKTEHRMSTFGVPLEFHDPSPRALKSGELNDSLPGLHSTVALEVPLTVPSPQANNSA
KHKKQLSLSSGVLFGSSLSVEDPLSLNPRAPSFNPADPLQRPSQAIPVERSLIPDAEVTG
GGIPHQEPLKEPECPLELEEGENEKSSVEPEDESKEDTEHIYESILDLKLDESPIIVEKA
PTVSPAAVAEPTPVITPTSPSPTQTQVENASPNTAVYANVTELKKNIPQSPPLEALSPDL
PLSQEEWQVHTDKDSGKEFYYRPATGQTTWADPHSTLPSADMELPKEALAIPALSMALSP
ALSPALSPALSPALSPALSPALSPASSQGSNWEQVFDETTGRNYFYNPTSGATSWGAPEP
IAPSSPVTEPPVLKLPDRGPPPLPKEDYLTEDHGAPDTSSSVFPKDIPPMPQAKLAIIPR
AILDSVPAGWNRSIEADGKTVFTSERTQEQWLKSVDQEGKTYYYLRDGSRSQWNLPAELP
GAASLSKVGNGVDQDSPLVLKNWRHTMGPAQFGPSQEDNRFFPTHRRNVSDVTSEASSSG
NSPETPRHTDRLGVRSRLSHLSTDSHHEHTHLLEKAGILNKTKVADNGKRIRKNWSPSWT
VLHGGILTFHKDPKSAPSGNSNKTNQITPEYTVELRGATVGWAPKDKSSKKNVLELKTRH
GCEYLVQYDTESIICDWHRIILDTVRQLDQDHLSEEEEEEPMEKSPLASDRDKRTSSATK
ITPGISAESSDQGRVRTKLRKFLQKRPTLQSVKEKGYIRDNVFGCHLDTLCHRENSTVPR
FAEKCIRAVEIRGLDIDGIYRVSGNLAVIQRLRHKADHEENLDLEDGQWEEIHVITGALK
LFLRELPEPLFPYSFFDKFIAAIKIQDYPQKVLYFRDLVRSLPLPNHDTMHLLFKHLLKV
IEFGEKNRMSVQSVAIVFGPTLLRPQTESANITVYMVYQNQIVELILKEFETVFAPS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttggtgtgcaacatggggctggtgctggtagagtttgagtacgagtacacg
ggccgcgacgggggcctggtgtccatcaagcccaacgaacgatacatcctgctggccaag
accaacgaccactggtggcacgtgaggaagaacgagcttgcaaggcccttctatatacct
gctaaatacgtcaaggagctccccgcagagttcccatccccgctggactttgctgaccca
cccagtcctgatttggtcccggttcctgagccggtgccagtgccagtcccaaagcactcc
gtaccagaccgggcagaaacgagggcaggagatgaggtgactatccgtctccgctccccg
aagagacatcagaagactgagcaccgcatgtccacatttggcgtacccttagaattccac
gacccgtctcccagggcattgaagagcggcgagctgaacgactctctgccgggccttcac
tccaccgttgcccttgaggtccccttaacagtgccctcgcctcaagccaacaatagtgcc
aaacacaagaagcaattaagcctgagttccggtgtgctcttcggctcttccctgtcggtg
gaggatcctctctccctgaacccccgagcccccagcttcaacccagctgaccccctccaa
cggccctcccaggccatcccagtggagaggtccctcattcctgatgccgaggtcaccggt
ggcgggattccccatcaggaacctctgaaagagccggaatgtcctctggagctggaggag
ggagaaaatgagaaatctagtgtggagcctgaggacgaatcgaaggaggacactgagcat
atttatgaatccatattggacctgaagctggatgagtcccctataatagtggagaaggcc
ccgacagtgagtcctgctgctgtggctgaacctacacctgttatcactcccacttctcca
tctccaacacagacacaggtggagaatgccagccccaacactgctgtttacgccaacgtc
acagagctgaagaaaaacatcccacaatcccctccgttagaagctctgagtcctgacttg
cccctttcccaggaggaatggcaggtgcacactgacaaggacagcgggaaagagttctat
taccgcccagccacgggccaaaccacttgggccgacccccacagcaccctcccctccgca
gacatggagctgcccaaggaggcgttggctatcccagccctgtccatggccctgtccccg
gccctgtccccagccctgtccccagccctgtccccggccctgtccccagccctgtccccg
gccctctcaccagcctcatcccagggttccaactgggaacaggtgtttgatgagaccacc
ggtcgaaactacttctataaccccacctctggggccacgtcctggggagctccggagccc
atcgctccctcctctcctgttactgagcctcctgtgctgaagctcccagacagaggaccg
ccacctctcccaaaggaagactacctgacagaagaccacggagctccagacacctcctcc
tcggtgttccccaaagacatcccgcccatgccgcaggctaaactggccatcataccccgg
gccattctagacagtgtcccggcgggctggaaccgctccatagaggcagatgggaagacc
gtattcaccagcgaacgcacacaggagcagtggctcaagtctgtggatcaagaaggaaag
acatactactacctgagagacggctccagatcccagtggaaccttccagcagagctccca
ggtgcagccagtctgtccaaggtggggaatggagtggaccaggacagcccgctggttctg
aagaactggagacacacaatgggcccagctcagtttggcccctcccaagaagacaacagg
ttctttccaacacataggagaaacgtttcggacgtcaccagtgaagcatccagctcaggc
aactcccctgagacgccacgccatactgataggttgggagtacggagtagactgtcacat
ctgagcacagactcacatcatgagcatacacatctactagagaaggcagggatcctgaac
aaaaccaaggtggctgacaatgggaaaagaattaggaagaattggagtccgtcatggaca
gtgctgcatggaggcattctcacgtttcacaaagacccaaaatctgcaccctcgggaaac
tctaacaagaccaatcagatcaccccagagtacacagtggagctgcgtggagccactgtg
ggctgggcccccaaggacaagtccagcaagaagaacgttctggagttgaaaacgcgtcat
gggtgtgagtacctggtccagtacgacacagagagcatcatttgtgactggcacaggatc
atactggacaccgtaagacagctggaccaagatcacttgtcggaagaggaagaggaggag
cctatggagaaatctccacttgcttcagacagagacaagaggaccagctcagccactaaa
attacgcctggcatcagtgccgagtcatcagatcaggggcgtgtccgcaccaaactacgc
aagtttctccagaagaggcccacactgcagtcagtgaaggagaagggctatataagagat
aatgtgtttggttgtcatctggacacgctgtgccatcgagagaacagcactgtgcccagg
tttgcagagaagtgcatcagggcagtggagattagaggtctggacattgatgggatctac
agagttagtgggaatctagctgtcattcagagactacgccacaaagcagatcatgaggaa
aatctggacctagaggatggtcagtgggaggagattcatgtgatcacgggggcgctaaag
ctcttcctgagggagctgcctgaacctctcttcccttacagcttcttcgacaagtttatc
gctgccatcaaaatccaggactatcctcagaaggtgttgtacttccgtgacctggtgagg
tcccttcccctgcccaaccacgacaccatgcacctccttttcaaacacctcctcaaagtg
attgagtttggggaaaagaaccgtatgtcagtccagagtgtggccatcgtgtttggccct
acgttactcaggccccagactgaatcggccaacatcaccgtttacatggtctaccagaac
cagattgtggagctcatcctcaaagagtttgagacagtatttgcccccagctga
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