Oncorhynchus tshawytscha (Chinook salmon): 112258782
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Entry
112258782 CDS
T05605
Symbol
nbr1b
Name
(RefSeq) next to BRCA1 gene 1 protein
KO
K17987
next to BRCA1 gene 1 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112258782 (nbr1b)
04137 Mitophagy - animal
112258782 (nbr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112258782 (nbr1b)
03029 Mitochondrial biogenesis [BR:
otw03029
]
112258782 (nbr1b)
Membrane trafficking [BR:
otw04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
112258782 (nbr1b)
Pexophagy
Other pexophagy associated proteins
112258782 (nbr1b)
Aggrephagy
Cargo receptors
112258782 (nbr1b)
Xenophagy
112258782 (nbr1b)
Other autophagy associated proteins
Midbophagy
112258782 (nbr1b)
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
112258782 (nbr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_BRCA1_IG
PB1
DUF5320
Motif
Other DBs
NCBI-GeneID:
112258782
NCBI-ProteinID:
XP_024289125
LinkDB
All DBs
Position
LG09:77886687..77897840
Genome browser
AA seq
973 aa
AA seq
DB search
MDFYINLKVNFRGNAKNFLLSGSETKSWESMEAMVKRSFGLCNLQVTYFDEENEEVSINS
QMEYEEALKSASRQGNRLHMNVYETRGQPTRVPAKASGGEPKRGFRPPQHCPTLAQVVSR
KVQAAVPEQGMVIMKELKGTKEEDKTPPAWFTSYMEKFKDQVVREAVEKICREFSGQCCI
HKPIGAEAQIPEVTSSTLPGGPSFTPACSSCRGQTAGGGYQCSVCTSCTLCEPCSFSHDP
SHNLVRARTPLSIPEHGSPAPDHSRFYRRGDRSFRKAEKQRLKAEKRQLKAEVKEIRKQL
KMERRGLQWSAAGDGSSSPVLLQPRATQANSPERPKRPCPLVVPAMTALFLDENLPDGTR
LRPGTRFIKYWKMRNTGSVSWSSETKLKFMWGNLAVASGDRWREVAVPFLQPGQVGVVSV
ALCAPALEGSYTSHWRLAHGGEQFGPRVWCSIVVDPLAPAAMMADGVLVSPCVTPQGKNP
LSTDKGGKSCAAASRDQALMSVDQGEREYYIPSVDLLTAQDLLSFELLDINIVQELESVP
NNTPADMTPCISPLPHDGPLQEKPTLRLIQEEAEAHQAQGVTSIQPSQGLVPGAEGGRVP
AQEEGEEDMSGTQFVCETVMRSLTLEEAPDHTPLCGNCPSKVVRPAAQGGSASSSLKGKG
VEKRLEVRSEKTRDISPVAPALAPPQLAIPELMMPDEGLESDIESICMDARGDKDKGEDK
GELTEGNRGARSRSSSASSEDYIIILPDCFDTSRPLGESMYSSALSQPGDAPDTPTDPDS
QGRTTPEGEQDEAEETVSGSSSANDMLCTSQTLDAVPLTPVVVAPPRLNLALTPSLDSND
QTEAAAESLDRTEVYQKGESEDGSKQPDSPSASGDSEDHSEDPRHPGITGGLVKGALSVA
ASAYKALFTGQPGPVQPPVDGATQDTMMGVLVEMGFGDRPLNQRLLKKHNYNLLDVVNEL
VQMTDNDWYSTRY
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggacttctacatcaatttgaaggtgaatttcagggggaatgcgaagaattttctcctg
tcaggttcggagacgaagagttgggagtcaatggaggccatggtgaaaaggtcctttggc
ctgtgtaatctacaggttacttattttgatgaggaaaatgaggaggtatccataaacagc
caaatggagtatgaggaggcattaaagagtgcatccaggcaagggaaccggctgcacatg
aatgtgtatgagaccaggggtcaacccacgcgtgtgccggccaaggccagtggaggggag
cccaagagagggttccgtcccccacagcactgcccaaccctggctcaggtggtgagccgg
aaggtccaggctgctgtccccgaacagggcatggtgatcatgaaagaactaaaggggacc
aaagaggaagataagacacctccagcatggtttacatcttacatggagaagttcaaagac
caagtagtgagggaggcagtggagaagatctgtcgggagttctcaggccagtgctgcatc
cacaagcccattggggctgaggcccagatccctgaggtgacctcctccaccctgcctggg
ggtcctagtttcacccctgcctgcagcagctgccggggccagaccgctgggggaggatac
cagtgcagtgtgtgtacgtcctgcacactgtgtgagccctgcagcttctcccatgacccc
agccacaacctggtgagagccagaacacccctctctatccctgagcatggctcaccagcc
ccagaccacagcaggttctaccggcgaggggaccggagcttccggaaggcggagaagcag
cgtctgaaggctgagaagcgtcagctgaaggcggaggtaaaggagatcaggaagcagctg
aagatggaaaggaggggcctgcagtggagtgccgccggtgacgggagctcctcccccgtc
ctgctccaacccagggccacccaggccaacagcccggagcgtcccaagcggccatgccct
ctggtggtgccagccatgacggccctgttcctggacgagaacctgcctgatgggactcgt
cttcgcccgggcaccaggttcatcaagtactggaagatgagaaacactggcagcgtgagt
tggagctctgaaaccaagctgaagttcatgtgggggaatctggcggtggcgtcgggtgac
cgctggcgtgaggtggctgtgcctttcctgcagccaggtcaggtgggcgtagtaagcgtg
gccctatgcgccccggccctagaaggctcatacacctcccactggcgtctggcacatggt
ggggagcagtttggccctcgcgtctggtgcagcattgtggtggaccccctggcccctgca
gccatgatggcagatggcgtgctggtgtcaccctgcgtcaccccacaggggaagaacccc
ctctccacagataagggtgggaagtcttgtgctgcagcctctagggatcaagcactcatg
tcagtggaccaaggcgaacgagaatactacattccctctgtggacctgctcacagcccag
gacttactctcctttgagctgcttgacatcaacattgttcaggaactagagagcgtgccc
aacaacaccccggcagatatgaccccgtgcatatccccattgccccatgacggtcccctg
caggagaagcccaccctgcgtttgatccaggaggaagcagaggcccatcaggcccaggga
gtcacaagcatccagccgtctcagggcctggtgccaggggcggaggggggccgggttcca
gcccaggaggagggagaggaggatatgagcgggactcagtttgtgtgtgagacggtgatg
cgctcgctcacactggaggaggccccagaccacacacccctgtgtgggaactgccccagc
aaagtggtccgcccagcagcccaaggtggctccgcctcctcttctcttaaagggaaaggt
gttgagaagcgtttggaggtgaggtcggagaaaacccgggacatatcccccgtggcccca
gccctagcaccaccccagctggctataccagagctgatgatgccagatgagggactggag
tcagacatcgagagcatctgcatggacgccagaggggacaaagacaagggcgaagataaa
ggagagttgacagaggggaacaggggagcccgcagccgttcctcctcggcctcatccgag
gattacatcatcatcctccctgactgcttcgacaccagccgcccgctgggagagtccatg
tacagctccgccctctcacagcctggagatgcccccgacacgcccacagaccctgacagc
cagggccgtaccactcccgagggggagcaagatgaagcagaagagactgtttcaggctcc
agcagcgccaacgatatgctgtgcacctcccagacgttggacgccgtgcccctaacccct
gtggtggtggcaccccctcggctcaacttagctcttacacccagcctagacagcaatgat
cagaccgaggcagcagcagagtccctggacaggactgaggtctaccagaagggagagtca
gaggatggttccaagcagccagacagcccatctgcttctggtgactcagaagaccactcc
gaagaccctaggcacccaggcatcactggaggcctggtgaaaggagccctgtctgtcgca
gcatccgcctacaaggctctgttcactgggcagcctggcccagtgcagcccccagtggat
ggagcaacccaggacaccatgatgggggtgttggtggagatgggctttggtgaccggccg
ctcaaccagcgactgctgaagaaacacaactacaacctgctggacgtggtcaatgaactg
gtccagatgaccgacaatgactggtactccacccgctactga
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