Oncorhynchus tshawytscha (Chinook salmon): 112258825
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Entry
112258825 CDS
T05605
Name
(RefSeq) choline transporter-like protein 2 isoform X1
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112258825
04147 Exosome [BR:
otw04147
]
112258825
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
112258825
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
112258825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
112258825
NCBI-ProteinID:
XP_024289205
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All DBs
Position
LG09:complement(80308718..80335276)
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AA seq
725 aa
AA seq
DB search
MPEQQPYYGKNGEPKKYDPTFKGPIYNRGCTDIVCCILFIICILGYVAVGILAWSQGDPR
KVIYPTDSRGQFCGQAGTPLETKPLLFYFNIMKCASPMVLLEFQCPTTQMCVEKCPDKFM
TLLKAYTNKEDFKYYKNFCKEGLEGLTVTQILSSGLCPAMLTPSKPFTRRCFPALGQKKG
GEITVGNNSKFDDGEGNIRDAKDLVAGVKNATVVIEARQVAMKIFEDYTQSWYWILIGLV
IAMLISLLFIVLLRFLAGIMVWVMIVMVILVIGYGIFHCSMEYVSLKSEAGSNVTLKDLG
FQTDFSVYLHIRQTWLAFIIILAIVEVVIILLLIFLRNRILIAIALIKEASRAIGYVMSA
LFYPLFTFALLSIVIAYWAVTAVFLSTSNQPIYKVFNETACDHSRKICEPANFSTSSMKA
ECPDSKCLFAFYGGETVYHKYLIGLQFYNVFLFFWCANFVTALGQMTLAGAFASYYWALV
KPDDMPAFPIFSSLGRSLRYHTGSLAFGSLILSIIQIIRVLLEYIDHKLQGTQNKCTKFL
LCCLKCCFWCLEKFIKFINRNAYIMVAIYGKNFCTSAKDAFFLLMRNMIRVAVLDKVTDF
LLFLGKLLIVGLVGIFAFFFFSGRVKAFENTAPNLHYYWVPILTVVVGSYLIAHGFFSVY
AMCVDTLFLCFCEDLERNDGSLARPYYMSASLHDILSENKAVEETEEPTQSSPHQPDDQH
VQLKQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcagcaaccctattacggaaagaatggtgaaccaaaaaagtatgaccccacc
ttcaaaggccccatctataacaggggctgcactgacattgtatgctgcatcctcttcatt
atttgcatactgggctatgttgcagtgggaattcttgcctggtcccaaggagaccccagg
aaggtgatctaccccacagacagcagaggacagttctgtgggcaggcaggcacacctctg
gagacgaagcccctgctgttctacttcaacatcatgaagtgtgccagtcccatggtgctg
ctggagtttcagtgtccaaccacacagatgtgtgtggagaaatgccctgataagttcatg
acgctcctgaaggcctacaccaataaagaggattttaagtattataagaacttctgcaag
gagggtctagaggggctgactgtaacacagatcctgagttctggcctgtgtcctgccatg
ctgacgccaagtaaacccttcacccgtaggtgcttccctgccctgggccagaagaaggga
ggggagatcaccgtgggaaataactctaagtttgatgatggggaggggaacattagagat
gccaaagatctggtggcgggggtcaagaatgccacagtggtcattgaagctcgacaagtg
gccatgaagatctttgaggattacacccagtcctggtactggatcctaatagggttggtg
attgccatgctcatcagtctcctcttcatcgtcctcctgcgcttcctggctgggatcatg
gtttgggtcatgatcgtcatggtgattctggtcattggatacggtatcttccactgctcc
atggagtatgttagcctgaagtcagaggcaggctctaatgtcactctaaaggacctgggc
ttccagacagacttctctgtgtacctgcatatcagacagacctggctggctttcattatt
attctggccattgtggaggtcgtcatcattttgctgctcatcttcctcaggaatagaatc
ctcatcgctatcgctctcatcaaagaagccagcagggccattgggtatgtgatgtcagcc
ctgttttaccccttgttcacctttgccctcctatccattgtcatcgcctactgggccgtg
accgctgtgttcctgtccacctccaatcagcccatctataaggtgttcaatgagacggcc
tgcgatcactccaggaaaatctgcgagccagctaacttcagcacctccagtatgaaggcg
gagtgcccagactccaagtgtctgtttgccttctacggtggagagacggtataccacaag
tacctgattggcctgcagttctacaacgtcttcctgttcttctggtgtgccaactttgtg
acagcactgggtcagatgaccctggctggggcctttgcctcctactactgggccttggtc
aagcctgacgacatgcctgccttccccatcttctcatcccttggcagatcactcaggtat
cacacaggttccctggcgtttggctcgctcatcctctccatcatccagatcatcagggtt
ctgctggagtacattgaccacaagctacaaggaacccaaaataagtgcacaaagttccta
ctgtgctgtctcaagtgctgcttctggtgcctggagaaattcatcaagttcatcaacaga
aatgcctacattatggtggcgatatatggcaagaacttctgcacgtctgccaaagatgcc
ttcttcctccttatgaggaacatgatcagggtagctgtcctggacaaggtgacagacttc
ctcttgttcctgggcaaactcctcattgtggggcttgtgggaatctttgcgttcttcttc
ttctctgggagggtgaaggcctttgagaacacagcgcccaacctccactactactgggtt
cccatcctgacagtggtggttggttcctaccttattgcccacggcttcttcagtgtgtac
gccatgtgtgtggacacactcttcctctgcttctgtgaagacctggagagaaatgatggc
tctctggcaagaccgtattacatgtcagcttcgctccatgacattctgtcggagaacaag
gctgtggaggagaccgaggagccaacccagtcctcgccacatcagccagatgaccaacac
gtccagctgaaacaatag
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