Oncorhynchus tshawytscha (Chinook salmon): 112258930
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Entry
112258930 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 17
KO
K20638
Rho GTPase-activating protein 17
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112258930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112258930
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112258930
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_3
Motif
Other DBs
NCBI-GeneID:
112258930
NCBI-ProteinID:
XP_024289355
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All DBs
Position
LG27:57194..102522
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AA seq
871 aa
AA seq
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MKKQFNRMKQLANQTVGRAEKTEVLSDDLLQIERRMEMVRVVSHNTHKRMVTCLQGHIGT
DAEKRHKKLPLTALSQAMVDGGSQLGEESLIGKMMEVCGEAENRLASELLQHEVQIEKDV
LDPLNQLAEVDIPNILKQRKQLARLVLDYDSARARWLQATKSIISGTNTQALTAKADLLK
EEVDEAMNKMELCKDQLAADMYNFFSKEGDYACYYVMLLEAQADYHRKSLTVLESVLPTI
QAQQDSWTEKPAFGTGLEEHLKRSSREIALPLEACIMMLLETGMKEEGLFRIAAGTSKLK
KLKAALDCSTSQLEEFYSDPHAVAGALKSYLRELPEPLMSFQLYDEWIQASSVLEPDKRL
QALWVVCDQLPKNNKANLRYLVKFLSKLAQDSEVNKMTPSNIAIVLGPNLLWAKTEGTLA
EMAAATSVHVVTIIEPIIQHADWFFPEDVEFNVSGMFAMPTPSNHINHSMEYDCSTIERK
RPGSMVGPENDTLRKDSSANKLSDHNTIPRRGSNTLGRKQHVSPAFLPPLPPVESPGPGQ
VTGCVAELQAPPEGCQPSLALGMAALVAAQQLLATTTEGLSNPKRDPTSTQTLHQRNGSG
GGNPGTASPAGGGAGGQLGVVGPGAGSMGPSPNMMRRGTKKPAPAPPKLPNPPSGQPSNL
TNHNPSSGQSLSPSPRPLSSSSHSPTSPTLPTSQPSTXPRRHSNNQPSIQAPNHPPPQPP
TPSQVSPPSQPRALGHPTGDNGAEYSPTDTPTPPDTPPPSTVPQDIPSAHPASTLPFQSG
SLPRPRPVPKPRNRPNIPPPPQPPTQGNDTNGICSTAYKIMDPALSLKGLTRALVPEFAV
DQQPVTAPSMAPMASVSQPKDSDLDTESTIL
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacagttcaatcggatgaaacaactcgccaaccaaacagttggcagagcagag
aaaacagaagttctcagcgatgaccttctacagattgagcggcgcatggagatggtacgt
gtggtctcccacaacacacacaagaggatggtcacgtgtctgcagggccacattggcacc
gacgcagagaagagacataaaaagcttcctctgacagcgctgtctcaagccatggtggac
ggaggcagtcagctgggagaggagtctctgattgggaaaatgatggaggtgtgtggggag
gcagagaacaggctggcgtcagagctgctgcagcatgaggttcagatagagaaagatgtg
ctagaccccctaaaccagctagcggaggtggacattcccaacatcctcaaacagaggaag
cagctagccaggctagttcttgactatgattctgccagagcgaggtggttgcaggcaacc
aagtcgataatctcaggaacaaacactcaagcactgacggccaaggcagacctgctcaaa
gaggaggtggatgaagctatgaataaaatggaactgtgcaaggatcaactggctgcagac
atgtacaatttcttctcaaaggaaggggactatgcctgctactacgtaatgctcttagag
gcccaagctgattaccatagaaaatctctgactgtcctcgagagtgtcctgccaaccata
caagcacagcaagactcgtggacagagaagccagcatttgggacgggtctggaggagcat
ctgaagaggagcagcagagagatcgctctgccattagaggcctgcatcatgatgctgctg
gagactggcatgaaggaggagggcctcttcaggatcgcagcagggacctcaaaactgaag
aagctcaaggctgctctggactgttccacctcacagctggaggagttctactcggacccc
cacgctgtcgctggagccctgaagtcttacctgagagaactacctgaacctctgatgagc
tttcagctttacgacgagtggattcaggcatctagtgttctagagccagacaagcgactg
caggccctctgggttgtgtgtgatcaattaccaaagaacaacaaagcaaacctaaggtat
ctggtgaagttcctgtccaagctggctcaggacagtgaggtcaacaagatgacccctagc
aacatcgccattgtactgggaccaaacctgctgtgggccaaaacggagggcactctagct
gagatggctgctgctacctctgttcacgtggtgaccatcatagaacccatcatacaacac
gctgactggttcttccctgaggatgtggagtttaatgtatcagggatgtttgccatgccc
accccttccaaccacatcaaccactctatggagtacgactgttccaccatcgagaggaag
aggcctggtagcatggtggggccagagaacgatacccttcgcaaggacagttctgctaac
aaactgtcggaccataacaccatcccccgtagaggcagcaacacgttaggtagaaagcag
catgtttcacccgccttcctgccccccttaccccctgtggagtccccagggcctgggcag
gtcacggggtgtgtggccgagctccaggccccgccggagggctgccagcctagcctggca
ctgggtatggctgccctggtggcagcgcagcagcttctagctaccaccacggagggtctc
agcaacccaaagcgtgaccccacctccacccagaccctccatcaaaggaacggttcagga
gggggcaacccgggcacagccagcccagcaggaggtggagcagggggacagctgggagtg
gtaggccctggggccggatccatggggcccagtccaaacatgatgcgcagaggtacaaag
aagccagcccctgcccctcccaagctgcccaaccccccttcaggccagcccagtaacctc
accaaccacaacccctcctcgggccagtccctcagcccctcccccagacccctctcttcc
tcaagccactcccctacctcccccaccctgcccacatcccagccctccaccnacccccgc
cgccactccaacaaccagccctccatccaggcccccaaccacccacccccacagcccccc
acaccctcacaggtcagccccccgtcccaacccagggccctcggccatcccacaggagac
aacggggcggaatattctccaacagacacccccaccccgcctgatacacctccaccctcc
accgtcccccaggacatacccagtgcccatcctgcctccaccttgcccttccagtcaggc
tccctcccccgaccacgcccagtccccaaacccagaaacaggcccaacattcctccgccc
cctcagccccccacacagggaaatgataccaacgggatctgcagcacagcctacaaaatc
atggacccagcgctgtctctcaaagggttgacccgagccttagtccctgagtttgctgtg
gaccagcagccagtgaccgccccctccatggcccccatggcatccgtatctcagcccaaa
gattcagacctggacacagagagtaccatcctataa
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