Oncorhynchus tshawytscha (Chinook salmon): 112258935
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Entry
112258935 CDS
T05605
Name
(RefSeq) zinc phosphodiesterase ELAC protein 2 isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112258935
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
112258935
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
112258935
Prokaryotic type
112258935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
112258935
NCBI-ProteinID:
XP_024289361
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Position
LG09:complement(83997369..84005275)
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AA seq
875 aa
AA seq
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MFSMTKVSLLCKSIAWLFVRHTSTSRQQSFACSEHRFPRTIFQFPVTMSTNTTDNQHRGS
KKPRAPKETLRHVKSREQRKRGVDVHGPATVYAQVVGAGSRDNGASLYVFSEFNRYLFNC
GEGTQRLMQEHKLKAARLDNIFLTRMSWENVGGLSGMILTLKDTGVPEVVLSGPPQLEKY
VNAIRVFSGPLEEIKLAVRPYTEKQYTDDTMTVSQIPIFAQLREDGPKCSPNSGRSSPSS
SPQRRELWRPEDSEDTSTDSRKERATSPGGKARATRDPSLVVAFICKLHPKKGNFLVAQA
KNLGLPVGTAAIGPLIAALKDGKSVTYEGREIHPEEVCTPTDPGPAFIVVECPSEEFVQP
ICIDQQLSRYQRGGTEDPAALVVHMSPESVLKTDEYKQWMERFPSTTEHLILNEQVCTVH
NVRSHKIQTQLNLIHPEIFPELQHYTTKETQAALHVPNVRAECLLKFQLRPKIEWQRDAI
PSCDTEEFVKEAAEAPNFLQEVEECKRFCATDAAVLSGRADKYPEVVFLGTGSALPMKIR
NVSGNLVNISATQSVLLDCGEGTFGQLCRHYGDSVDETLAKISTVFISHMHADHHTGLLS
LLFQRERALATLGKAFSPIYLIAPVQMMTWLNQYHDHCEEILSHVNIVPSKVMCEGAEVS
KFKTKAFIQALLKKSDLAKFQTCPVRHCKNAFACSITHQSGWQLVFSGDTMPCDALAHMG
KNATLLIHEATLEDGLEDEAVEKRHSTTSQAIGIGMKMNAEFIMLNHFSQRYAKIPLFSE
DFNDRVGISFDHMRIRFGDFRILPRLIPPLKALFAEEIGEMEERRGRRELKQMKEAIAES
NEEQRTPNEGETGKGAKREPEEPTQDVGSKRLKTN
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtatgactaaagtgtctctactctgtaaatctattgcatggctattcgtgaga
cacacatctacaagtcgccaacaaagcttcgcatgcagtgaacatcgttttccccggact
attttccagtttccggtgacaatgtctacgaacacaacagacaaccaacatcggggatca
aagaaacccagagcacccaaagaaacattgcgacatgtgaagtctagagaacagaggaaa
cgtggagtagatgtgcatggaccagccactgtctacgcgcaggtcgtcggggcagggagc
cgagataatggcgcatcactttatgtcttctctgagttcaataggtacctcttcaactgt
ggtgagggaacacagaggctgatgcaagagcacaagttaaaagctgctcgcttggacaat
attttcctcactagaatgagctgggagaatgttggtggtctatcagggatgatattgaca
ctgaaagacactggtgtccctgaggttgttctctctggaccaccacaactggagaaatat
gtgaatgccatcagagtattttctggaccactggaagaaatcaagctagctgttcgacct
tacaccgagaaacaatacacagatgacacgatgacagttagtcaaataccaatatttgcc
cagctcagagaggatgggccaaagtgctcccctaactcagggaggagcagcccctccagt
agtccccagaggagggagctgtggaggccggaagactctgaggacaccagcacagacagc
aggaaggagagggcaaccagcccaggtggaaaagcaagagcaacaagggatccgtcttta
gttgtggcattcatttgtaagcttcatcctaagaaggggaacttcttggttgctcaagca
aaaaaccttggattaccagtaggcactgcagctattggtcctctcattgcagctctgaag
gatgggaaaagtgttacctacgaaggaagagagatccatcctgaggaggtgtgcactccc
actgatccaggaccagccttcattgttgtggagtgtccctctgaggagtttgttcaacca
atctgcatcgatcagcagctgagcagataccaacgtggaggaacagaggaccctgctgcc
ttagtagtccacatgagccccgagtctgtgctgaaaacagatgaatacaagcaatggatg
gaaaggtttccatctaccacggagcacctgatcctgaatgagcaagtttgcactgttcac
aacgtgaggagccacaagattcaaactcagctcaatctgattcatccagagatatttcca
gagctccagcactatacaacaaaggagacccaggctgccctgcatgtccccaatgtcaga
gccgagtgtcttctgaagttccagctcagacccaagattgaatggcaaagagacgccatc
ccctcttgtgacactgaagagtttgtgaaagaggctgcggaggcccctaacttcctccaa
gaagtggaggagtgcaagcggttctgtgcgactgatgctgcagtgctgtctgggcgggca
gacaaatacccagaggtggtctttttgggaactggatcagctcttcctatgaagatcagg
aatgttagtggtaacttggtcaacatcagtgccactcagtcagtgctgctggactgtgga
gagggcacctttggccagctgtgccgacactatggggacagtgtggacgagactcttgca
aagatctcaactgtcttcatctctcacatgcacgcggaccatcacacaggattgttgagt
ttgctgtttcaaagagagagagccttggcaactcttgggaaagccttcagccccatctat
ctgatagcccctgtccagatgatgacctggctcaaccagtaccatgaccactgtgaggag
atcctcagccatgtcaacattgtccctagcaaagtcatgtgtgagggggctgaggtgtcc
aagttcaaaaccaaggcattcatccaagcgctgctgaagaaatctgatttagcaaagttc
cagacttgtccagtgcgtcactgtaagaatgcctttgcctgcagcatcactcatcagtct
ggctggcagctggtcttctctggggacacaatgccctgcgatgccctcgcacatatggga
aagaatgcaactttacttattcatgaagccacattggaagatggattggaggacgaggct
gtggagaagagacatagtaccacctcccaggccatcggtattggcatgaagatgaatgct
gagttcatcatgctgaaccacttcagccagcgctatgccaagatccccctcttcagtgag
gacttcaacgacagagtgggaatatcttttgaccacatgaggattcggtttggagacttt
agaatcctccccagactcatcccgcccctcaaagccctgtttgccgaggagatcggagag
atggaggagaggagggggaggagggagcttaaacagatgaaagaagccattgctgaaagc
aacgaagagcagaggacacccaatgaaggcgagacgggcaaaggtgccaaacgagagcca
gaggaaccaacacaggacgtgggaagtaagagactcaaaacaaactaa
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