Oncorhynchus tshawytscha (Chinook salmon): 112258958
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Entry
112258958 CDS
T05605
Symbol
gfap
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112258958 (gfap)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112258958 (gfap)
Membrane trafficking [BR:
otw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112258958 (gfap)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
112258958 (gfap)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
ZK652
Myosin_tail_1
TPR_MLP1_2
DUF1664
DUF7491
GAS
TolA_bind_tri
ANG-1
T1-F
CENP-F_leu_zip
PMD1-like
BLOC1_2
Fib_alpha
CCDC89
SPC25_N
GOLM
T4SS_LegC2C7
Motif
Other DBs
NCBI-GeneID:
112258958
NCBI-ProteinID:
XP_024289404
UniProt:
A0A8C8M9Z1
LinkDB
All DBs
Position
LG27:complement(18924851..18934147)
Genome browser
AA seq
457 aa
AA seq
DB search
MESQRVLSSYRKRFGPQGAGSVGGGVRLNSLSSSRFSLHGTPRHLTHSSTISRLSLGSAG
GALLLGTPGNRLDFSADSLLKAQYRETRTNEKVEMMGLNDRFASFIEKVRFLEQQNTVLV
TELTQLRGKEPSRLGDIFQEELRELRRQVDGLSAGKARLEIERDNMAADVATLKQRLQDE
MVLRQDAESNLNAFRQDVDEASLNRVQLERRIDALQDEIAFLKKIHEEELRELQEQLMAQ
QVHVDVDVSKPDLTAALRDIRVQYESVASSNIQETEEWYRSKFADLTDAATRNADALRLA
KQEGNEYRRQLQAMTCDVEALRGTNESLEQQLREMEDRFSVETAGYQDTVGHLEEEIQTL
KEGMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITVPMQSFSNLQFRETSMDTKF
SPEAHVKRSIIVRTVETRDGEIIKESTAERKEIPDSP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcagagagtcctgtcgtcttacaggaagcgtttcgggccccagggggccggc
agcgtgggtgggggcgtgcggctcaacagtctctcctccagccgcttctccctccatggg
accccccgccacctgacccactccagcaccatttcccgtctctccctggggtcggctgga
ggggccctgctcctggggacccctgggaaccggctggacttctcggctgactcactcctc
aaggcccagtaccgggagacgcgcaccaacgagaaggtggagatgatgggtctgaacgac
cgcttcgccagctttatagagaaggtgcgcttcctggagcagcagaacacggtgctggtg
acggagctgacccaactgagggggaaggagcccagccgtctgggggacatcttccaggag
gagctgagggagctgcgcaggcaggtggacggactcagcgctgggaaggcccggctggag
atagagagggacaacatggctgctgacgtggccacgctcaaacagagactgcaagatgag
atggttcttagacaggatgcagagagcaacttgaacgcctttagacaggatgtggatgag
gcatctctgaaccgtgtccagttggagaggaggatagacgcgctgcaggatgagattgcc
ttcctcaagaagatccacgaggaggagctgcgtgagctgcaggagcagctgatggcccag
caggtccatgtggatgtggacgtgtccaagccagacctgaccgctgctctgagggacatc
cgggtccagtatgagtccgtggcctcctcgaacattcaggagacggaggagtggtaccgc
tccaagtttgccgacttgaccgacgcagctactcggaatgcagacgccttgcgattggcc
aaacaggagggcaacgagtaccgccggcaactccaggccatgacctgtgatgtggaggcg
ctccgtggaacaaatgagtctctggagcagcagctgcgtgagatggaggaccgtttctcc
gtagagacggctggttaccaggatacggtgggtcatctggaggaggagatccagactctg
aaggaggggatggccagacacctgcaggagtaccaggacctgctcaatgtcaaactggcc
ctggacatagagatcgctacctacaggaagctgctggagggagaggagagcaggatcact
gttccaatgcagagcttctccaacctgcagttcagagagactagtatggacactaagttc
tctccagaggcccatgtcaagaggagcatcatagtgcggactgtggagactagagacggg
gagatcattaaggagtctacagctgagaggaaggagattcctgacagtccttaa
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