Oncorhynchus tshawytscha (Chinook salmon): 112258966
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Entry
112258966 CDS
T05605
Name
(RefSeq) TBC1 domain family member 10B isoform X2
KO
K19944
TBC1 domain family member 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112258966
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112258966
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112258966
NCBI-ProteinID:
XP_024289414
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All DBs
Position
LG27:complement(18794297..18808207)
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AA seq
950 aa
AA seq
DB search
MAEISTLIPSPPAIGDTHAAPSFPIPSTAPPPPSSTTKENPIPKSSLYGDKASLTLTVPG
ETHPSHPPSPKSPKRGGRGPPPSPPKRVSSALTPETPVPPPLIPPERPAPLPVIALDTPA
IPPVDVALWQREGVKETYMGTGASPVLAVKQEVSNPGGKELLNAPSEGPTQAHSEQEVPG
VTQQTTSPSSCLNLTPNLYPSVHVTVNTNPATDYAQPQSMVESPPPPAPTYTPPPPDSTQ
AAAAPEAQNRQPPEESQNPHPNPPKLDTPSLSPIPETSSQSPRRAELPNTPSRAGHPSPP
VIQEPVSLSLPYPRAPAPDTLSYLESASMMSGTLESLSGLGEDGSSIGSDSEINGLAVRR
TDKYGFLGGTQYSEGSDKDIRVDVARQRELKWLDMFNNWDKWVSRRFQKVKLRCRKGIPS
SLRAKAWQLLSNSKELLDSNPGKFEELEREQGDPKWLDIIEKDLHRQFPFHEMFAARGGH
GQQDLYRVLKAYTVYRPEEGYCQAQAPVAAVLLMHMPAEHAFWCLVQICETYLPGYYSAG
LEAIQLDGEIFFSLLRRVCPMAYRHLKKFKIDPILYMTEWFMCVFSRTLPWSCVLRVWDM
FFCEGVKIVFRVGLVLLKQMLGSVDKLREVQGMYETMERLRNIPPESVREDLLVQEVVSL
AVTEALIERECSIQVRKWRESRGELTHQPVRRLHGTRDIHEHKRRASAISSGGSFSFLGS
IPPPGPLRASSSLLSLPGFRKSKTPFRSQKMGSFSGASGMEAMQRQNPSAAASSPPRGPA
HKPPMSSGSVARVPASQSPLVGSGPGPSSGPAQTSAQSQPGASAPVHHTPPNTLSPKVTS
EQITPTIPSPTANNTPLPPFPDGGRGGGGATGGEDDRKKKRSKEDKKKEKEEEKRKEKEK
KKDKADKESQKKEKERAEKEKKREKGGKKKDRGGGEAEEKNGATAPRDSA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaatctccaccctaatcccctcacctccagctataggtgacacacatgctgcc
ccctccttccccataccttctactgccccccctcctcccagcagcaccactaaggagaac
ccaatccccaagtcctctctgtacggtgacaaagcttctctgacattaactgtaccagga
gagacacatccttctcaccctccttctcccaagtctcccaagagaggggggagaggacct
ccaccgagtccccccaaacgcgtctcatcagcgttaactccagagactccagtgccccca
cctctaatacccccagagagacctgcccccttacctgtaatagccctagatactcctgcc
atcccaccggtagatgtagcattgtggcagagggagggagtaaaggagacatacatgggg
acaggggccagcccagtgttggctgtaaagcaggaagtgagtaacccagggggcaaggag
ctgttgaatgccccctcagagggccctacacaggcccacagtgagcaagaggtaccaggg
gtaacacagcagactaccagcccctcctcctgtcttaatctcacccctaatctctacccc
agtgttcatgtcactgtgaacactaatcctgctactgattatgctcagcctcagtctatg
gtggaatctccccctcctcctgcccccacttacactccccctcctccagactccacccaa
gcagctgcagcccctgaagcacaaaatcgtcagccaccagaagaaagccaaaaccctcac
ccaaaccctcccaaactggacacccccagcctgtctcccatacctgagacctcaagccaa
tctcccagaagggcagagctacccaacacaccctccagagcagggcaccccagcccccca
gtgatccaggaacctgtctccctctccctgccctaccccagagccccagccccagacacc
ctcagctacttggagtcagccagcatgatgtcagggaccctggagtctctgtctggcctg
ggggaggatggaagctctatcgggtcagactcagagatcaacggcctggctgtcagacgc
actgacaaatatggcttcctcggcgggacccagtacagcgagggcagtgataaggacatc
agagttgatgtagcacggcagagagagctgaaatggctggacatgttcaacaattgggac
aaatgggtctcaagacgcttccaaaaggtgaagttgcgctgtaggaaggggatcccctct
tctctcagggctaaagcctggcagctgctctccaacagcaaggagctcctggactccaac
cctggcaagtttgaggagttggagagggagcagggagaccctaaatggttggacattata
gagaaggacctgcatagacagttccccttccatgagatgtttgctgctcgtggtggacac
gggcagcaggatctgtaccgggtactgaaagcctacacagtgtatagacctgaagaggga
tactgccaggcccaggccccggtggctgctgtcctgctcatgcacatgcctgcggagcat
gccttctggtgtctggtgcagatctgtgagacgtacctgcctggatattatagtgctgga
ttggaagcaatccagttggacggagagatcttcttctctctgctacgtcgtgtctgtccc
atggcctaccgtcacctgaagaagtttaagatagaccccattctctacatgaccgagtgg
ttcatgtgtgtcttttcacgcaccctgccgtggtcctgtgtgctacgtgtgtgggacatg
ttcttctgtgagggagtgaagatagtgttccgtgtgggcctggtgctgctcaagcagatg
cttggctcggtggataaactgcgggaggtccagggcatgtacgaaaccatggagcgcctc
cggaacatcccacctgagtctgtcagagaggacctattggtgcaggaggtggtgtcccta
gcggtgaccgaggctctgatcgagagggagtgcagtattcaggtaaggaagtggagggag
tccaggggcgaactgacccaccagcctgtccgacggctccacgggacacgggacatccac
gagcacaagcgtcgggcctccgccatcagctccgggggtagtttctccttcctggggtcc
atcccccctccagggcccctcagggcttcctccagcctgctctccctccccggcttccgc
aagtccaaaacccccttccgttctcagaagatgggctccttctctggggcctctgggatg
gaggccatgcagcgacagaacccctcagcggcagcttcaagcccacccagaggccccgcc
cacaaaccacccatgtctagtggctctgtagctagggtgcctgcctctcagagtcctttg
gttgggtctggtccaggcccctcttctggcccagcccagacctcagcacagagccagcct
ggtgcatcagccccagtacaccatacaccaccaaacaccctctcccccaaagttacttcc
gagcagatcacacccaccatcccatcacccaccgctaacaacacacctctgcccccgttc
ccagacggagggagaggaggaggaggagctacaggaggagaggatgacaggaagaagaag
aggagcaaggaagacaagaagaaagagaaggaggaggagaagaggaaagagaaggagaag
aagaaggacaaagcagacaaggagagccagaagaaggagaaggagcgggcagagaaagag
aagaaaagggagaaaggggggaagaaaaaggacagagggggaggagaggcagaggagaag
aatggagccacagcaccaagagattcggcctag
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