KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112258976
Entry
112258976         CDS       T05605                                 
Name
(RefSeq) elongin-B
  KO
K03873  elongin-B
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    112258976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112258976
   03400 DNA repair and recombination proteins [BR:otw03400]
    112258976
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     112258976
   Cul5 complex
     112258976
DNA repair and recombination proteins [BR:otw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112258976
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 112258976
NCBI-ProteinID: XP_024289422
LinkDB
Position
LG27:complement(18692192..18695846)
AA seq 119 aa
MDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRAPEEQRLYKDDMLLEDSKTLGDC
GFTNQTARPQAPGTVGLAFRLGDDAFEQLRVEPFSSPPELPDVMKPQDSGSTANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgtgtttctgatgatccggcgtcacaagactaccatcttcactgatgccaaagag
tccactacggtctacgagctgaagcgcatagtggagggtatcctaaagagggcaccggag
gaacagaggctgtacaaggatgacatgttgctggaggatagtaagactcttggagactgt
ggcttcacaaatcagacagccagacctcaggccccagggactgttggattagctttccgt
ctcggtgatgatgcatttgagcagctgagggttgagcccttctccagccccccagagctt
cctgatgtcatgaaacctcaggactctggcagcacagccaatgagcaggctgtgcagtga

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