Oncorhynchus tshawytscha (Chinook salmon): 112258982
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Entry
112258982 CDS
T05605
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112258982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112258982
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112258982
04147 Exosome [BR:
otw04147
]
112258982
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Coronins
112258982
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112258982
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112258982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40
WD40_4
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
Trimer_CC
WDCP
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
bZIP_1
BLOC1_2
TSC22
DUF7310
Beta-prop_SPT8
DUF5798
Seryl_tRNA_N
DivIC
ZapB
Motif
Other DBs
NCBI-GeneID:
112258982
NCBI-ProteinID:
XP_024289433
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MEVTMSRKVVRASKFRHVFGQGVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGG
GAFLVLPLNKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGL
VTPLNDPVVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVACGEAMVRIDSVHPD
LIYSACWNRDGSQILTSCKDKTIRVLDPRKGTVIAEKEKTHEGSRPVKAVFVSEGKILST
GFSRMSERQVALWDPKSFGEPLTLQELDTSSGVLLPFFDPDTGVVYLCGKGDSSIRYFEV
TDEAPYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSD
LFQEDLYPDTMGPEPSVEANEWFEGKEGQPILISLKDGFATTTKSKEFKVHKSLLKTTSA
AMGHQHGNTGEVHALQKEVKTLKETVEELTKRVSELESKN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaccatgtccaggaaggtagtcagggccagtaagttccgtcatgtcttcggc
cagggggtgaaggctgaccagtgctatgatgacatccgcatctcccagatgacctgggac
agcaacttctgctctgtcaaccccaagttcgtggccatgattgtggatgccagtggagga
ggggccttcctagtgctgcctctgaacaagacgggtcgtattgacatgtcccagcccaca
gtctgtggacacacaggcccagtgctggatattgagttctgtccccacaacgacaacatc
attgccagtggttcagaggactgcagtgtcatgatttgggagatcccggaaggtggcctg
gtcacgcccttgaacgaccccgtggtgaagctggaggggcactccaaacgcgtgggcatc
ctcagttggcaccccactgcccacaatgtgctcatgagcgcaggctgtgacaacgtggtg
atcctgtggaacgtagcgtgtggagaggccatggtgaggatcgactcggtccaccctgac
ctcatctacagtgcctgctggaacagggacggctcccagatcctcacctcctgtaaggac
aagaccatacgtgtgctggacccccgcaagggcacagtcattgccgagaaggagaagaca
cacgaaggctccaggcctgtcaaggctgtgtttgtgtccgaagggaagatcctgagcacc
ggcttcagtcgcatgagtgagagacaggtggcactttgggacccgaagagctttggggag
ccactcaccctgcaggagttggacaccagcagtggtgtcctattgcccttctttgaccct
gacactggcgtggtctacctctgtggcaagggtgacagcagtatccggtactttgaggtg
acggatgaggctccctatgttcactacctgtccatgtacagcagtaaggagagtcagaag
ggcatgggctacatgcccaagaggggcctggaggtcaacaagtgtgaaatcgccaggttt
tacaagctccatgagaggaagtgcgagcccattgtcatgacggtgccccgcaagtctgac
ctgtttcaggaggatttgtacccagacaccatgggtccagagccgtctgtggaggccaat
gagtggtttgaaggcaaagagggccaacctatcctgatctccttgaaggacggttttgcg
acaaccaccaaatccaaagagttcaaagttcacaaaagtcttctgaagaccacatcagca
gccatggggcatcagcacggtaacactggggaggtacatgccttgcagaaggaggtgaag
actctgaaggaaacagtagaggagctgaccaagcgcgtgagcgaactggagagcaagaat
tga
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