Oncorhynchus tshawytscha (Chinook salmon): 112258990
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Entry
112258990 CDS
T05605
Symbol
med25
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25 isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112258990 (med25)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
112258990 (med25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Med25
VWA
Motif
Other DBs
NCBI-GeneID:
112258990
NCBI-ProteinID:
XP_024289443
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Position
LG09:complement(84840783..84856054)
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AA seq
753 aa
AA seq
DB search
MDLPIKPGANQVADVVFVIEGTANLGPYFESLRKHYILPAIEYFNGGPPAETDFGGDYGG
TQYGLVVFNTVDCAPESYVQCHAPTSSAFEFVSWIDSIQFMGGGAESCSLIAEGLSVALQ
LFDDFKKMREQIGQTHKVCVLLCNSPPYLLPAVESVSYTGCTADNLVKIIRDRGIHFSVV
SPRKLPALRALFDRASPVGGQVDPHPDYSQDPFHMILVRGISLPVSSGGGSGPLKPILPP
QPLPVSQPPLGPASQAPPPISTAHPYQPPPSLNAAQAAAQMAVEAANNQKSRFPGMVNPG
PPFSGQSTLPSVAGVKLAPSSQPSLSTVTIVSTPMLPQQQAPPPQQQQVQPPGQPQPNQQ
QPVPPQQQQPTANQQTPPSSQPGMPGVSAAQANPIGGQQQGVANKIVAWSGVLEWQEKPK
ASSMDSNTKLTRSLPCQVQVNQGENLNADQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQF
LFTNKDVESLKGLYRIMATGFAGCVHFPHSAPCEVRVLMLLYSSKKRIFMGLIPNDQSGF
VNGIRQVITNHKQVQQHRSIGSGGPMPGPPGQVQPNQNFLNRPQGPIPVSHGNVQQQSVV
VGMPSVSQVTLMEEQQRQANLMTMRASGAPNQQPPVTGAPPNQVAQGGQAPPQGAMLRLP
NPGANPQLRSLLLSQQQPQGGVGHMQGMMPHQGLGGQLVHPTPGAGPQMQAQWRQPLAGQ
MMMAAGQRGPGAQPPGMPQVSSVMEDEILMDLI
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcccattaaacctggcgccaatcaagtggcagacgtggtgttcgtcattgaa
ggaactgcaaacctcggcccctattttgaatccctcagaaaacattacatactacctgca
atcgagtacttcaatggaggccctccagcagagacagactttggaggagattatggaggc
acacagtatggtcttgttgtgttcaacacagtggactgtgctcctgaatcctacgtccag
tgtcacgcaccaaccagctcggcctttgagtttgtctcgtggattgacagcatccagttc
atgggaggaggagcagagagctgtagtctcatcgcagagggtctgtctgtggccttgcag
ctctttgatgacttcaaaaagatgagggagcaaataggtcagacacacaaagtctgtgtg
ctgctgtgtaactctccgccatacctgctccctgccgtggagagtgtcagctatacgggc
tgcactgcagacaatctggtcaagatcatcagagatagagggattcatttttctgtagtg
tcgccacggaaactgccagcgttacgggcgctgttcgacagggcgtcaccagtcggggga
caggtcgacccccacccagactacagccaagaccccttccacatgatcctagttaggggt
atctcacttcctgtgtcatcagggggaggatcgggccctctcaaaccaattctaccccct
caacccctgcctgtcagtcagcctcctcttggtcccgcctcgcaggctcctccaccaata
agcacggcccatccatatcagcccccaccttcccttaacgcggcccaggcagctgcacag
atggctgtagaggcagccaacaaccagaagagtcgcttcccaggcatggtcaatcctggt
cccccattcagcggtcagtcaactctcccatctgtagcaggagtgaagttggctccctcc
agtcagcccagcctatccacagtcaccatagtttccacacccatgttgcctcagcaacaa
gcccctcccccgcagcagcaacaagtccagccgccgggacaaccacagcccaatcagcag
cagccggtgccccctcagcagcagcagcccacagccaatcagcagacgcccccatcctca
cagcctggcatgcctggtgtgtctgcagcccaggcaaatccgattggggggcagcagcaa
ggcgttgccaataagattgtagcatggagtggagtactggagtggcaagagaagcccaaa
gcctcgtctatggattccaataccaaactcactcgctccctgccctgccaggtgcaagtc
aaccaaggagagaacctaaatgccgaccagtggccacagaagctcatcatgcaattgatc
ccacaacagttactgacaacactcggtcccctcttcagaaactctagaatggttcagttt
ctcttcaccaacaaagatgtggagtcactaaaaggtctttatcgtatcatggccactgga
tttgcggggtgcgtccacttcccccacagcgccccctgtgaggtgcgggtgctcatgctg
ctctactcctccaagaagaggattttcatgggcctcatccccaacgaccagagtggcttc
gtcaacggcatccgacaggtcatcaccaaccacaaacaggtccagcagcaccgctcgata
ggttcaggagggccgatgccagggcctcctggccaggttcaacccaatcagaacttcctc
aaccggccgcaggggcccatccctgtctcccatggcaacgtgcagcagcagtctgtggtg
gtgggcatgccctctgttagtcaggtcactctgatggaggaacagcagagacaggccaac
ctgatgacgatgagagcatccggcgcacctaatcagcagccacctgtcaccggtgctccg
cccaaccaggtcgctcagggtggacaggccccgccccagggtgccatgctccgccttcca
aacccaggagccaatccgcagctgcgcagtctcctcctcagccaacagcagccacagggt
ggtgttggtcacatgcagggcatgatgcctcaccaggggctgggagggcagctggtccac
cctactccaggagcgggcccccaaatgcaggcccagtggagacagcccctggcaggtcag
atgatgatggctgctggtcagaggggccctggagcccagccccccgggatgccccaggtg
tcttccgtcatggaggatgagattctcatggaccttatttga
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