Oncorhynchus tshawytscha (Chinook salmon): 112259008
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Entry
112259008 CDS
T05605
Name
(RefSeq) perforin-1
KO
K07818
perforin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112259008
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Gene cluster
GFIT
Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
112259008
NCBI-ProteinID:
XP_024289519
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Position
LG09:84962213..84965781
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AA seq
589 aa
AA seq
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MSLLIVCLWAGLMLSIPHPSCQSCTIGSANECKEAEFAPGTNLAGEGFDITKMKRKGAFV
IDMNVWKRKDKTCTLCKNPYLEGKQQRLPLAVVDWRPNHHCSMKVSSKLHRSSESLVSSS
GSSVENNWQVNLELEKGSISGKIMLAGTNSKLAEYSMEKTKSDKFSFTSHSVSCGYYSYR
VSGQPKLHQEFKTAVKNLPKIYQQENKQHYYKLIDNFGTHYITKVSLGGTVQSVTSIKQC
QASLQGLSAEEVKMCLDVEASASVGDRNSLKTEFKHCQEDKSKTESKASFSSVFNDRFTE
VKGGHTTEPELLFSAEKDPASYKAWLESLPHYPDIVSYSLESLHELLPTTNPARKHLRKA
ISDYILEKALWKNCSEPCQTGIKSDYRDSCVCSCHNIPGVSADCCPTRKGLARVVITVQR
GANLWGDHTTATDGYVKVAFAGQTIGRTKVIYNNNNPSWAMSYDLGTVDLSTSKKLRFEV
WDEDDKWNDDLLGECEKELTAGVKEDLCNLQHGQMFYKWEAVCAPSLGGSACMDYVPSPM
NPHLEKVYVSRHSRLIPKDMLVSMGVLVDGPNLHGNKSLSPGNRECGRF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtccttattgatagtgtgcctctgggcagggcttatgttgtccattcctcatcccagt
tgccaatcatgcaccatcggctcagccaatgagtgcaaagaggcagaatttgctcctgga
accaacctagcaggggaaggctttgacatcaccaaaatgaaacgcaaaggagcctttgtc
attgacatgaacgtgtggaaacgcaaagacaagacctgcaccctctgtaagaatccctat
ctggaagggaaacaacagaggcttcctttggcagtggtggattggagaccaaaccaccac
tgtagtatgaaagtgtccagtaaactccatcgctccagtgagtctctcgtcagctccagt
ggctcttctgtggagaataactggcaggtcaatctagagttagagaagggatcaataagt
gggaagattatgctcgctggtaccaactccaaattggctgagtactccatggagaaaacc
aagagtgacaagttcagtttcacaagccacagtgtgtcctgcgggtattacagctatcga
gtatctggccagcccaagttacaccaagaattcaagacagcagtgaagaatctccccaaa
atatatcaacaagaaaacaaacaacattattacaagcttattgataactttggcacgcat
tacattaccaaggtgagcctgggtggaacggtgcagtctgtgaccagtatcaagcagtgc
caggccagcctgcagggtctcagtgcggaggaggtaaagatgtgtctggatgtggaggcg
tctgccagtgtgggtgacagaaacagcttgaagactgagttcaagcactgtcaggaggat
aagtctaagacagagagcaaggccagcttctccagtgtcttcaatgataggttcacagag
gtgaaaggtggccacaccacagaaccagagctcctcttctctgctgaaaaagatcccgcc
tcctacaaggcatggctggagtccctaccacactatccggacattgtctcctattcgctg
gaatctctccatgagttgctgcccaccaccaacccagctcggaagcacctgcgcaaggcc
atcagcgactacatcctggagaaggccttgtggaagaactgttctgaaccctgtcaaact
ggcatcaaaagtgactacagagactcctgcgtctgcagctgccacaacatccccggggtg
agtgccgactgctgccccacccgcaagggcctggcgcgggtggtcatcactgttcagaga
ggggccaacctgtggggagaccacaccactgccactgacggctacgtgaaggtggctttc
gcaggccagacaatcggacgcactaaagttatctacaacaacaacaaccccagctgggca
atgagctatgacctgggaaccgtggatctgtcaaccagtaagaagctgagatttgaggtg
tgggacgaggacgacaagtggaacgacgacctgttaggagaatgtgagaaggagctgaca
gccggggtgaaggaggatctctgcaacctccagcatggccaaatgttctacaagtgggag
gcagtgtgtgcccccagtctaggtggctctgcctgtatggactatgtgccctcccctatg
aatccccacctggagaaggtttatgtgtctcgccactcccgtctcattccaaaggacatg
ctggtgagtatgggagtgttggtggacggacccaatctccatggcaacaagagcctcagt
ccagggaacagagagtgtggtcgattttag
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