Oncorhynchus tshawytscha (Chinook salmon): 112259013
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Entry
112259013 CDS
T05605
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
112259013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259013
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112259013
04147 Exosome [BR:
otw04147
]
112259013
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Coronins
112259013
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112259013
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112259013
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1899
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_4
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
DSE1_N
PAC11
ANAPC4_WD40
Trimer_CC
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WDCP
Beta-prop_WDR75_1st
Beta-prop_WDR41
NBCH_WD40
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
KIF21A_2nd
ASA1
TRM82_WD
Beta-prop_HPS5
bZIP_1
DUF7310
BLOC1_2
TSC22
DUF5798
MYCBP_helical
Beta-prop_SPT8
DNAI3_WD
DivIC
DUF6779
SOGA
Beta-prop_NUP159_NUP214
UbiJ_C
ZapB
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
112259013
NCBI-ProteinID:
XP_042170527
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MSRKVVRASKFRHVFGQGVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFL
VLPLNKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLVTPL
NDPVVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVACGEAMVRIDSVHPDLIYS
ACWNRDGSQILTSCKDKTIRVLDPRKGTVIAEKEKTHEGSRPVKAVFVSEGKILSTGFSR
MSERQVALWDPKSFGEPLTLQELDTSSGVLLPFFDPDTGIVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTMGPEPSVEANEWFEGKEGQPILISLKDGFATTTKSKEFKVHKSLLKTTSTAMGH
QHDNTGEVHALQKEVKALKETVEELTKRVSKLESKN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaggtagtcagggccagtaagttccgtcatgtcttcggccagggggtgaag
gctgaccagtgctacgatgacatccgcatctcccagatgacctgggacagcaacttctgc
tctgtcaaccccaagttcgtggccatgattgtggatgccagcggaggaggggccttccta
gtgctgcctctgaacaagacgggtcgtattgacatgtcccagcccacagtctgtggacac
acaggcccagtgctggatattgagttctgtccccacaacgacaacatcattgccagtggt
tcagaggactgcagtgtcatgatttgggagatcccggagggtggcctggtcacgcccttg
aacgaccccgtggtgaagctggaggggcactccaaacgcgtgggcatcctcagttggcac
cccactgcccacaatgtgctcatgagcgcaggctgtgacaacgtggtgatcctgtggaac
gtggcgtgtggagaggccatggtgaggatcgactcggtccaccctgacctaatctacagt
gcctgctggaacagggacggctcccagatcctcacctcctgtaaggacaagaccatacgt
gtgctggacccccgcaagggcacagtcattgccgagaaggagaagacacacgaaggctcc
aggcctgtcaaggctgtgtttgtgtccgaagggaagatcctgagcaccggcttcagtcgc
atgagtgagagacaggtggcactttgggacccgaagagctttggggagccactcaccctg
caggagttggacaccagcagtggtgtcctattgcccttctttgaccctgacactggcatc
gtctacctctgtggcaagggtgacagcagtatccggtactttgaggtgacggatgaggct
ccctatgttcactacctgtccatgtacagcagtaaggagagtcagaagggcatgggctac
atgcccaagaggggcctggaggtcaacaagtgtgaaatcgctaggttttacaagctccat
gagaggaagtgcgagcccattgtcatgacggtgccccgcaagtctgacctgtttcaggag
gatttgtacccagacaccatgggtccagagccgtctgtggaggccaatgagtggtttgaa
ggcaaagagggccaacctatcctgatctctttgaaggacggttttgcgacaaccaccaaa
tccaaagagttcaaagttcacaaaagtcttctgaagaccacatcaacagccatggggcat
cagcacgataacactggggaggtacatgccttgcagaaggaggtgaaggctctgaaggaa
acagtagaggagctgaccaagcgcgtgagcaaactggagagcaagaattga
DBGET
integrated database retrieval system
