Oncorhynchus tshawytscha (Chinook salmon): 112259052
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Entry
112259052 CDS
T05605
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a isoform X1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
112259052 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
otw01004
]
112259052 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112259052 (slc27a1a)
Lipid biosynthesis proteins [BR:
otw01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
112259052 (slc27a1a)
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
112259052 (slc27a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112259052
NCBI-ProteinID:
XP_024289589
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MAEFTEKGRYYLGGAVGGRRNAITFNMGMRNAASASLSLGSLGLLRLFGVPWSWSLAAGF
GVFLGTGGWKYLYIVVRTAKRDLNGLYVLLRVKIALWHHLRLNSNIPSIFAQTVKQHPNK
PALIYDATGETWTFTQLDLLSNAVAQWALAQGWAPGDVVALFMESRPLQVALWLGLAKVG
VEAALINFNLRRDALLHCVGVSVSRGIVFGAELAGAMLEVSSSLSPSMVRFCTGELSVDC
LASLSAQNLDYILASAPTLPPPSCIPPKSFNDRLFYIYTSGTTGLPKAAIVVHSRYYRIA
AFGYHAFRMRQDDIIYDCLPLYHSAGNIMGVGQCLINGLTVVVKKKFSASRFWEDCIKHN
CTVVQYIGEICRYLLSQPVRPSEKGHRVRLAVGNGLRPSVWEAFTERFGVAQVGEFYGAT
ECNCSIANMDGKVGACGFNSRILPNVYPICLMKVDEETTELVRDRHGLCVPCRPGEPGLL
VGRINQQDPLRRFDGYANQDATRKKIANNVFKKNDSAYLSGDVLVMDELGYMYFRDRSGD
TFRWRGENVSTTEVEGTLSGLLGQADVAVYGVSVPDVEGKAGMASIADPTGTFDCDAFLR
EVQQALPPYARPVFLRISPQVDTTGTFKIQKTRLQREGYDPRLSTDQIYFLNSRAGRYEA
VNEELHSAIVEGRMAL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcacagagaaaggacgatactatttgggcggtgctgttgggggtcgtcgc
aatgcaataacattcaatatggggatgcgcaatgcagcgagtgcctctttgtctctggga
tcgctgggtctgctgcgtctcttcggggtcccctggtcctggagcttagcagcaggcttc
ggggtctttctgggcacaggtggttggaagtacctctacatcgtagtccgtactgccaaa
agagacctaaatggcctttacgtgttgttacgagtcaagatagccttgtggcaccaccta
cggctcaacagcaatatcccctccatctttgcccagacagtgaagcagcacccaaataaa
cccgccctcatctacgatgccacaggagagacgtggaccttcacccagctggacctgctg
tctaacgctgtggcccaatgggctctggcccagggctgggccccgggggatgtggtggcc
ctcttcatggagagccggcccttgcaggtggccctctggctgggcctggccaaggtaggg
gtggaggcagcactcatcaacttcaacctgcggagggacgctctcctgcactgtgttgga
gtgtctgtgtccagagggatcgttttcggagccgagctggctggtgccatgttggaggtg
agttcatccctgagcccgtcgatggtgcggttttgtacaggagagctcagtgtagactgt
ctggcctccctgtctgcccagaatctggactatatcctggcctcggcccctacactgccc
cctccttcctgcatcccacccaagagcttcaatgatcgtctgttctatatatacacctca
ggcaccacaggactcccgaaagctgccatagtggtgcacagtcggtattaccgtatcgct
gcttttggctaccatgctttccgcatgcgccaggatgacatcatctacgactgccttccc
ctctaccactctgcaggtaatatcatgggtgtaggccagtgtctcatcaatggactcact
gtggtggtgaagaagaaattctcagccagtcgcttctgggaagattgcatcaagcacaac
tgcactgtggtgcagtacataggggagatctgtcgctacctgctgtcccagccggtgcgg
ccatctgagaagggtcaccgggttcgcctggcggtggggaatgggctgcgccctagcgtc
tgggaggccttcaccgagcgctttggggtggcccaggttggtgagttctacggagccact
gaatgcaactgtagcatcgccaacatggacggcaaggtgggagcttgtgggtttaacagc
cgcatcctgcccaatgtgtacccaatctgcctcatgaaagtggatgaggagaccacagag
ctggtgagggacaggcacggcctgtgtgtgccctgccgtcctggggagccagggctgctg
gtgggaaggatcaaccaacaggatccactacggaggtttgatggctacgccaaccaggat
gccaccaggaagaagattgccaacaacgtcttcaagaaaaatgactcggcatatctgtca
ggggatgtgttggtgatggatgagctaggctacatgtacttccgggaccgcagtggagac
acgttccgctggagaggagagaacgtctccaccaccgaggtggagggaacactgagtggt
ctgctgggccaggccgatgtggctgtgtatggggtatctgtaccagatgtggaagggaag
gcagggatggcttccatcgcagacccaacagggacatttgactgtgatgcgttcctgcga
gaggtccaacaggccctgcccccttacgcccgtcccgtgttcctacgcatctccccacaa
gtagacaccacaggtacctttaaaatccagaagacccggttgcagagggagggatacgat
ccgcgcttatcaaccgaccagatttactttttgaactccagagcagggcgttatgaggct
gtgaatgaggagctacacagtgctatagtggagggtagaatggctctttga
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integrated database retrieval system
