Oncorhynchus tshawytscha (Chinook salmon): 112259103
Help
Entry
112259103 CDS
T05605
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112259103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259103
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112259103
Endosome - Golgi transport
Arf GTPase associated proteins
112259103
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112259103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_6
PH_3
RA
GAP1-M
Ras_bdg_2
Motif
Other DBs
NCBI-GeneID:
112259103
NCBI-ProteinID:
XP_042182687
LinkDB
All DBs
Position
LG09:complement(29263744..29278973)
Genome browser
AA seq
1132 aa
AA seq
DB search
MADQEDSLRAMQNSFRSQFSMEEVECEDIEASRRTSSVDEDSIYLACTLSRSYNLGDSDL
HHTPVIKMGWLDKTPPQGSLIFQKRWVMLDAQYLRYFQNEKEVYSKRIIAILFVTEVLNV
GEQKFEVVTRNRTFLFRAENNTVREEWVSVLKETIQQRRSSMEMSLVNFSFTSGQRDSGV
SLISKQGYLEMNGLRSKVYVVICADRVFLYGNAEEHSQGVGITYIEMNVGTVKSTDKRSF
NLTTFYRTFSFLAESAQQRDQWVEALQDCVSRSLSSDVVAQKIWAVEANQRCADCGAPHP
DWASVNLCVVLCKCCAGVHRGLGQSVSKVRSLRMDEKVWTDNLIQVFLLGNNRVNLFWAA
NTPPSEALQPSSDSEKRQRFVSAKYCQGKYRRYHALFGQQEALNKALCSTVQTDDVLETL
SLVFCGADVNCYTGDPELPSPVSVAQHYGQILQVEFLTHNHNTDLPGSRAGNHTLLEAAL
PVSHTGYLFKTASSIRPVTECKAKGDFSRRWCSLNQGNFSYYESEKSSSQSGGMKMSDVL
CLLVNPPGKHGYAHSFELYHDSGRVYLFGEDSSDKVKGWIKAIAKALVPSAAEDLVCWPF
ARVGRLSYTEGQSHHSPLLGWFSLGGSRLLLLLHGADRVENIDLRKIKELSMEQGAGAGA
VVLVDGGRSLRVEGDRRPDFQGWLSGLQQGSGRGDGPLDQQQLTDTDVPVIVDRCMSYIT
QHGLKSEGIYRRCGVNSKIAALLFFLRHDARQVRLNEGERQVDDVANVLKRFLREVGEGV
FNGHQASLPWLHTTTVSEMSERVSQYQALLHSLPRVNRATLGAVINHLYCVQCFADENQM
NMHNLAIVFGPTLFQMDGTDNSAGQVVEDLIQNYQDIFNVDEEQFQRQLDMISHVIKAQK
EHTEEGSPSPLTICGVYLERKEEGSELLVQISQEVSAEELVCKVLRRRNIPPQQGDYWSC
FLVDNNQEIERPLHYQQQALTIYFSLGKDCHLVVKKNCYMEAILTYIAGRVDVSRNGLIK
FCEEKGQRGKGTFSRRLCVLSGLSLRLYKDVKSSQPERECQIHALKVYCGIKRKLQPPSC
WGMTVVCEKAVRDIQQWYLCCESKNELIEWLATFMSLQHDGDLWPAASRLDS
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaggaggattcattgcgagctatgcagaacagcttccgcagtcagtttagt
atggaggaggttgagtgtgaagacattgaagcgagcaggagaacatcatcggttgatgaa
gacagtatctatcttgcctgcacactgtcacgatcatacaacctcggagactctgatctt
caccacactcctgttatcaagatgggctggctggacaagaccccacctcaggggagcctt
attttccagaagcgttgggtgatgttggatgcacagtacctgcgatactttcaaaatgag
aaggaggtctactcaaagcggatcatagccatactgtttgtcactgaagtgcttaacgtt
ggagagcagaagtttgaggtggtgacaaggaacaggactttcttgttccgtgctgaaaac
aacactgtcagggaggaatgggtgtcagtactgaaagaaactattcagcagcgtcgtagc
agcatggagatgtcccttgtgaacttcagttttactagtggacagcgtgatagtggagtc
tctctcattagtaaacaaggatacctggagatgaatggactgcgctccaaggtctatgta
gtcatctgtgctgacagggtcttcctctacgggaacgctgaggagcacagccagggtgtt
ggcatcacctacattgagatgaatgtgggtactgtgaagagcacagacaaacggtccttc
aatctcaccaccttctacagaacattcagtttcctggccgagtcggcgcagcagagggat
cagtgggtggaggccctgcaggactgtgtcagtcgctctctgtccagcgatgtggtggcc
cagaagatctgggctgtggaggccaaccagcgctgtgcagactgtggcgccccccatcca
gactgggcctctgtcaacctctgtgtggtcctttgcaagtgctgtgcaggcgtgcacagg
ggtctgggccagagtgtgtccaaagttcgcagtctgagaatggatgaaaaggtgtggact
gataaccttattcaggtgtttctgttaggtaacaacagggtaaacctgttctgggcagct
aacacgccaccaagcgaggcgctccaaccatcaagtgatagtgagaagcgccagcgcttt
gtctctgctaagtactgtcaggggaaatatcgccgctaccatgctctgtttggccaacag
gaggccctcaacaaagctctgtgcagtaccgttcagacggatgatgtattggagactctg
tctctggtgttctgtggagcagatgtgaactgttatacaggtgatccagagctgcccagc
cctgtgtccgtggcccaacactatggacagatattacaggtggagttcttaactcacaac
cacaacacagatctgccagggtctagggctggaaatcacacactcctagaggctgctctc
cccgtctcacacactggttatctcttcaagaccgcttcttcaatacggccagtaacagag
tgcaaagcaaaaggagattttagccgtcgatggtgctctctgaaccaaggtaacttcagc
tactatgagagtgagaagagctccagtcagagcggcgggatgaagatgagtgatgtcctg
tgtctgttggtcaatcccccagggaaacatggttatgcccattcctttgagctgtaccat
gactctgggagagtctatctatttggagaagactcctctgacaaagtgaaagggtggatc
aaggccatcgccaaggcgctggtcccctctgcagcagaggacctggtgtgctggcccttt
gcgagggtgggtcggttgagctacactgagggccagagccaccatagccccctcctgggc
tggttctccctggggggctccagactgctcctactcctccacggagcagatcgagtggag
aacatcgacctgcgcaaaataaaggagctctccatggagcagggggctggtgctggtgct
gtggtgctggtggacggaggcaggagcctgcgtgtggagggggacaggaggcctgacttc
cagggctggctgagtgggctccaacagggctcagggagaggagatggccccctggaccag
cagcagctcactgacacagacgtccctgtcatcgtggaccgctgcatgagctacatcaca
cagcatggtttgaagtcagagggcatctatcggaggtgtggtgtgaactccaagatcgcc
gccctgctgttctttctccgccatgatgcccggcaggtccgtctgaatgaaggggagcgc
caggtggatgacgtggcaaacgtcctgaagaggttcctcagggaagtgggagagggggtt
ttcaatggccatcaggcctctctgccatggctccacaccactactgtcagtgagatgagt
gagagagtgtcccagtaccaggccctcctccacagcctcccccgagtcaacagagccact
ctgggggctgtcatcaaccacctctactgcgtccagtgctttgcagatgagaatcagatg
aacatgcacaacctggccattgtgtttggtcccacgctcttccagatggacggcactgat
aacagcgcaggacaggtggtagaggatctcatccagaactaccaggacatcttcaatgtg
gatgaggagcagtttcagagacagttggacatgatctcgcatgtcatcaaagcacagaag
gaacacacagaggagggaagcccctcacctctcaccatctgcggtgtttacctggagagg
aaggaggagggctctgagctgctggttcagatctcccaggaagtgagtgctgaagagctg
gtatgtaaggtcctgagacgcaggaacatccctccacagcagggggactactggagctgc
ttcctggtcgacaacaaccaggagatagagcgtccattgcactatcagcagcaagcgctg
actatctatttctctctgggtaaagactgccatctggtggtcaagaagaactgctacatg
gaggccattcttacctacatagcaggcagggtagatgtctcccgaaacggcctgatcaag
ttctgtgaagagaaaggtcaaaggggaaagggaaccttcagcagacgcctctgtgtgctc
agtggcttgtctctaaggctgtacaaagatgtgaagagttctcagcctgagagggagtgt
caaatccacgctctgaaggtctactgtggtatcaagaggaagttacagccaccgtcatgc
tgggggatgactgtagtgtgtgagaaggcagtacgagacatacagcaatggtacctgtgc
tgtgaatcaaagaacgagctgatcgagtggctggccacttttatgagcctccagcatgat
ggtgatctgtggccagcagcttccaggctagattcttga
DBGET
integrated database retrieval system
