Oncorhynchus tshawytscha (Chinook salmon): 112259118
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Entry
112259118 CDS
T05605
Symbol
igsf5a
Name
(RefSeq) immunoglobulin superfamily member 5 isoform X2
KO
K06786
junctional adhesion molecule 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112259118 (igsf5a)
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
C2-set_2
C1-set
TM_ErbB1
ig
MpPF26
Orthoreo_P10
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
112259118
NCBI-ProteinID:
XP_024289640
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All DBs
Position
LG09:31331302..31356188
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AA seq
349 aa
AA seq
DB search
MASVFFTLLLLYATGVSGVPQLEPLNVTVLRGSEARFNISLSEAWYSMSWMLKTVLVLTI
NSGTGVSEHNSRFSVKNYSSADIYCWEFIIWDVWRNDSGDVSCGVQEKPTQTAQLFVQES
GTVRIVGGNMTVAQGHQAIVQCEASGWFPEPTVSWVVDGVVVDQNSYNSSSEALDSLYNS
ISLLTVRGVNSVQVKCLASVSALTTPLSSSIYLVVEPQDWTVLIAVVCSIGGFALLVLLI
LGIVFCCKRRKEAKSSYQKEMGRTRSQIEMSGGAVGQRQGKENPAYVIDGQTSVTHSEFN
DSGYIQTNYTKHFEIPDLVNGNQAANGHASAYNILGVTGVRKHRHVTIV
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgttttcttcacgttgcttttactctatgcaacaggagtctcaggagtccct
cagctggagcccctgaatgtgactgtgctacggggctcagaggctcggtttaacatcagc
ctgtctgaggcctggtactccatgtcatggatgcttaaaactgttttggtcctcaccatc
aacagtggcactggtgtgtctgagcacaacagtcgtttctccgttaaaaactactccagc
gccgacatatactgctgggagttcatcatctgggacgtctggaggaacgactctggtgac
gtcagctgtggcgtccaggaaaagccgacccagaccgctcagctctttgtccaagagagc
ggcacagtgaggattgtgggaggtaacatgacagtggcccagggccaccaggccatcgtc
cagtgtgaggcctctggttggttccctgagcccacagtgagctgggtggtggatggggtc
gtggtggaccagaacagctacaacagtagcagtgaggccctggacagtctgtataactcc
atcagcctcctcactgtccgaggggtcaacagtgttcaagtgaagtgcctggccagcgta
tctgccctgaccacccccctgtccagctccatctacctggtggttgagccccaagactgg
actgtgctcatcgctgtcgtttgttccatcggtggcttcgctctgctggtgctgctcatc
cttggaatcgtcttctgctgcaaacgcagaaaagaagcaaaatccagctaccagaaggaa
atggggagaacgaggtcccagatcgagatgagtggtggcgcagtgggacagagacagggc
aaggaaaaccctgcatacgtgatagacggccaaacaagtgtcacccacagtgaattcaac
gacagtggttacatccagactaactatacaaaacattttgagattcctgatcttgtcaat
ggtaaccaggcagcaaatggccatgccagtgcatacaacatcctgggtgtaactggtgtc
aggaaacacagacatgttactattgtgtga
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