Oncorhynchus tshawytscha (Chinook salmon): 112259126
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Entry
112259126 CDS
T05605
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04136
Autophagy - other
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112259126
04136 Autophagy - other
112259126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259126
03029 Mitochondrial biogenesis [BR:
otw03029
]
112259126
Membrane trafficking [BR:
otw04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
112259126
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112259126
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
BCAS3_WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
CPSF_A
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_Aladin
Beta-prop_HPS5
EIF3I
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
112259126
NCBI-ProteinID:
XP_042163531
LinkDB
All DBs
Position
LG27:complement(1670902..1684775)
Genome browser
AA seq
446 aa
AA seq
DB search
MEERETPDGPGGPQGLISASFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAECPDVY
IVERLFSSSLVAVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRLVVCLEESV
YIHNIKDMKLLKTLLNTPSNPSGLCALSVNHGNSYLAYPGSQTIGEIMVYDTNNLSKVTM
IPAHDSPLAALTFNASGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVSISSLSFS
SDAQFLCASSNTETVHIFKLEQHSPSRDGESPTWGAYVGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNVCALSTVQKLPRLLVASSDGHLYIYNIDPQDGGECVLVRKHRLFE
GGEAPQEARQEEKESEDGRSLPPSTSPSYAATVSLPSTAPSSTTLTGYSEDGGAEKGDVI
PEHEFAEGPVCLDDENEFPPVSKQTN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacgggagacacccgacggtccgggagggcctcaaggcttgatcagcgcctcg
ttcaaccaggacaccacgtctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcagtggacaagatggactgcatccacgaaggagcggagtgtcccgacgtgtac
attgtggagcggttgttctccagcagtctggtggcggtggtcagtctctccatgccccga
cgtatgaacgtctaccacttcaaaaggggaacagagatctgcaactatagctactctaac
aacatcctctcagtccggctcaacagacagaggctggtggtgtgtctggaggagtcagtc
tacatccacaacatcaaagacatgaagctgctgaagacgctgctcaacacaccctccaac
ccctcaggtctctgtgccctctctgtgaaccatggtaactcctatctggcgtaccctggc
agtcaaaccatcggagagatcatggtctatgacaccaacaacctgagcaaggtgacgatg
atcccagcccatgacagtcccctggcagccctcacattcaacgcttcaggaaccaaactc
gccagtgcctccgagaggggtacagtgatcagagtgttcaccatcccagagggacagagg
ctgtttgagttccgtagagggatgaagaggtatgtgagtatcagctcgttgtcctttagt
tcagacgcacagttcctctgtgcctccagcaacacagagacggtccatatcttcaaactg
gaacagcacagccccagtcgagatggcgagtctcctacgtggggtgcctacgtggggaag
atgttcacagcagccagcacctaccttccctcccaggtctctgacatgatgcaccaagac
cgggcctttgccaccgtacgactcaacatgttcggactcaagaacgtatgcgccttgtcc
acggttcagaagctacctcggctgctggtggcatcatcagatggacatctctacatctat
aacattgacccacaggacggaggagagtgtgttctggtcaggaaacacaggctatttgaa
ggaggtgaggcgccacaggaagcacgacaggaagagaaggagtcagaggatggaaggtcc
ctcccaccgtcaaccagcccatcatacgctgccactgtgtccctcccctcgactgcaccc
tcttctaccactctcacaggctactcagaggatggaggggctgagaaaggggatgtgatc
cctgaacatgagtttgccgagggacccgtctgtttggatgatgagaacgagtttcctccc
gtcagcaaacagaccaactga
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