Oncorhynchus tshawytscha (Chinook salmon): 112259136
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Entry
112259136 CDS
T05605
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112259136
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112259136
Ion channels [BR:
otw04040
]
Ligand-gated channels
Serotonin (5-HT3)
112259136
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112259136
NCBI-ProteinID:
XP_042183788
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Position
LG09:40167687..40181264
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AA seq
787 aa
AA seq
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MVKNNKPIQVVSACDLELYAFPFDKQNCTLTFRSWLHSVNEVNLTLWRSAEEIANDQKSF
MDDGEWELLSVPSRYWHLRLDDRDYAHIQFNVLIRRRPLLYVVSLLIPSIFLMVVDVISF
YLPPNSGTRITFKTSILLGYTVFRVNLMNEMPATAIRTPLIGVFFAVCMALLVLNLSISI
FVVKLLHHNEKEVKEMSVSACLLDKYGSSSQTFLESNFTSVKTLVDVDQCGGYEFDLAPE
EDLLSLSELQESAPRLERLLQEVVALRLYLQEGESDDLAQADWVALCCKVDILLFRVYLF
ILVVYTSTLLLLLVKKLSNNTGRFANATLVRLSEYLSAGYKKGVRPVRNWRNCTMVAIDL
MVYSILSVDEKNQVLTTYIWYRQEWTDEFLVWNPEDFDDVNQMSIPTANVWVPDILINEF
VDVGKSPDIPYVYVTHYGLVRNYKPIQVVTACTLNIYNFPFDVQNCSLTFQSWLHTLNDI
DLKLMRSAEELKVDKSVFMNQGEWELLHVLSKYKRFSLDNIDSYAEMKFNVVIRRRPLFY
TVNLLLPSIFLMVMDLVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTLPATAIGTPLI
GVYFVVCMALLVISLTETVLIVRLVHKQDLQPHVPQWLKHLVLERATVLLCIRNKHSLCS
MLSRDSDHLGHYKENNISPGPLAARCNHHHHLHHTCESGRGGGDIMERGLGGLSVVRDNT
PPVMDNILQEISSIRGFLEKRDESRDIAKEWLQVGYVLDVLLFRVYLVAMLAYSITLGTL
WSVWQYA
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaacaacaaacccatccaggtggtgtctgcatgtgacctggagctgtacgcc
ttccctttcgataagcagaactgcactctgaccttccgcagctggcttcactcagtgaat
gaggtgaacctgacactgtggaggagtgcggaggagatcgcaaatgatcagaagtcattt
atggacgatggcgagtgggaactgttgtctgtgccctcccgctactggcatctccgcctg
gacgacagagactacgcccacatccagttcaatgtgttgatccgccggcgccccctgctg
tacgtggtgagtctgctcatccccagcatcttcctcatggtggtggacgtcatcagcttc
tatctgccgcccaacagtggcacccggatcacctttaagaccagcatcctcctgggctac
actgtcttcagggtcaacctgatgaacgagatgcctgccaccgccatcagaacaccactc
ataggtgtgttctttgcggtctgcatggcgctgcttgtgctgaatttatccatctccatc
tttgtggtgaagctcctccaccacaacgagaaggaggtcaaggagatgtcagtgtccgcc
tgcctcctcgacaagtacggctcgtccagccagaccttcctcgagagcaacttcacctct
gtcaaaacgctggtcgacgtggatcagtgtgggggctatgagtttgacctggctccagag
gaggacctactgtccctgagcgagctccaggagagtgctccacggctggagaggctgctc
caggaggtggtggccttgcggctctacctgcaagaaggggagagtgacgatttggcccag
gcagactgggtggccctctgctgcaaggtggacatccttcttttccgagtctacctgttc
atcctggtcgtctacaccagcactctgctgctacttttagtcaagaaactgagcaataat
accggacgctttgccaatgccaccttggtacgcctctccgaatacttgagtgctgggtac
aagaagggtgtgcgacccgtgcgcaactggcgaaattgcacaatggtggccatcgacctt
atggtgtactctatcctcagtgtggatgagaagaaccaggttctgacaacatatatatgg
tacaggcaggaatggacagacgaattcctggtatggaacccagaggattttgatgatgtg
aatcaaatgtccataccgactgcgaacgtgtgggtgcctgacatactaatcaacgagttt
gtggatgtggggaagtctccggacattccctatgtgtacgtgacccattatggactagtg
cgcaactacaagcctatccaggtggtgaccgcctgcactctcaacatctacaacttccca
ttcgatgtccagaactgcagcctgacctttcagagctggctccatacccttaatgacatc
gatctcaagctgatgaggagcgcagaggaactcaaggtggacaagagtgtcttcatgaac
cagggggagtgggagctgcttcacgtcctgtctaaatacaagcgcttcagtctggacaac
attgactcctatgcagagatgaagttcaatgtggtgatccgacgcagacctctgttctac
actgtgaacctgctgctgcccagcatcttcctgatggtgatggacctggtgggcttctat
ctccctccggacagtggagagagggtgtccttcaagatcactctgcttctgggatactcc
gtcttcctcatcatcgtctctgacacgctgcccgccaccgccatcgggacaccgctcata
ggtgtatactttgtagtgtgcatggccctgttggtgatcagcctgacagagacagtgttg
atagtgcgactggtgcataagcaggacctgcagccccacgtaccccagtggctcaaacac
ttggtgctggagcgggccacagtcctcctctgcatccgcaacaaacacagcctgtgctcc
atgctgtccagggactctgaccatctgggccactacaaagagaacaacatcagcccagga
ccccttgcagctcgatgcaatcaccaccaccaccttcaccacacctgcgagagtggccgt
ggtggcggggacatcatggagcggggtctggggggcctgtctgtggtgcgtgacaacacg
ccgcccgtcatggacaacatcctgcaggaaatctcatctatccgcggcttcctggagaag
agggacgagtcccgggacatcgccaaggagtggctgcaggtgggctacgtgctggacgtc
ctgctcttcagggtctacctggtggccatgctggcctacagcatcaccctggggaccctc
tggtccgtgtggcagtacgcctga
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