Oncorhynchus tshawytscha (Chinook salmon): 112259168
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Entry
112259168 CDS
T05605
Symbol
gmip
Name
(RefSeq) GEM-interacting protein isoform X1
KO
K20653
GEM interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259168 (gmip)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112259168 (gmip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C1_1
FCH
PHD
zf-RING-like
FAM86
C1_2
Vps52_CC
Motif
Other DBs
NCBI-GeneID:
112259168
NCBI-ProteinID:
XP_042183218
LinkDB
All DBs
Position
LG09:complement(66866843..66914758)
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AA seq
1181 aa
AA seq
DB search
MSLLELNMRCGVKHTPTEQGENDSHLPGMNTTLIPCQNGSGIRRMKYYDITWTVSRLRAV
AECLRQLRLLFEDCCELDGPNQLNVSMGLQALQQSLQPLAECYPSTGRPPVSHAFTMLRL
SLTDVKVPSKSETKRYSEIFRDFDNFELSLVNSTVEEMFLDTDSQSIAETVSTETTDNTE
LDHVTCEDVYPPDGDDKDGGLSAQEADLALCRCEGGVELALQYAKMWCRYAKDLLAWMEK
RISLEQEFAKNIVKAAETAKSCVAQQDMMPLQYIYTMALEHDVKTSQSTKQTSELLQQRC
YQALASKKNEIDKWRREFKDQWSREQRRMNEAVAALKKARQQYLQRSEDLEKTKAVTAKA
GDELTAGNKTLDKRRKSRDDAHSKVIEAEMQYRQCVCEAHDHQGKLERLKEKIIVHTRKL
ICQGDTVLKEATVNMFYFQRQQTEPVPLGYHNLELTCRPCEPGEPYLLYIFRKRSQEQPL
QTFTFQEFVPQNKSGRRKTSNPSSLQDSFSLPEESPVKRKGYSDSESIGGSLESLSSPAH
GNRMLLKAPSTGTMSSDDLDERDMGTVLEGDCVDSTPEGNGTVGKVRTTSRAALTHRFRK
MKSKMVKCKQCDTYIVVNGIECEECGVAVHRKCLEVLQHECENRKGVLFGVGFSLLPRDR
PDEVPYVVQRCTAEIESRALTLQGVYRISGSKPRIQKLCQVFETQGDQVDLSDLSPHDVT
SVLKHFFKELPEPLLTFDLYNDFIGVGKEIQRLSEREAAAETPGIVNDLTYNLRDLLERL
PPYRYYTLQHMMRHLHRVSENYEENKMSPSNLGIVFGPTLLRPLVSVDVSMMALLETTYQ
ALLVEFLITHHQHIFDAPPPTPTTPLPDTPPRAMCSGGGQKTVAGVDPGSQDPPTRGASS
KERPRSLETRTIKRDSSEGYISDKSSSNEAVDQLSPEASERAVMAVRGASTEAAALGDLV
GGPEPADSPSVGTQPRSHFNRQPVKYQRQPTPGLRRSAGTTSAGQLGEEEEEEDEEEERK
RNQPRSADSSRSPSPEPEPVSQRRRILRLELPPETTAYHLLSQAGGHDPESRTEREKTRP
YEVPQGRLRAGTVVVETSVAETTAVAAGANPTPSTGAQEAGLRSWSATLSQLNVNQSNNR
QGWVGERRRLSGEEGLSGPARKILSGLKLRRSHSGLQQHFV
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgttggaattgaatatgcggtgtggtgtaaaacatacgcctactgaacaggga
gagaatgattctcatttaccgggaatgaacaccacactaatcccgtgtcaaaacggtagt
ggtattcgtaggatgaaatactacgatataacatggacagtgtcaagactccgcgcagtg
gccgaatgtctgagacaacttcggctgctttttgaggactgttgcgagctggatggtcct
aaccagctgaatgtgtccatggggctccaggccctacagcagtctctccagcccctggcg
gaatgctacccatccacgggtcggcctccagtcagccacgccttcaccatgctgcgtctc
tccctcacagatgtgaaggtccccagcaaatcggagaccaagcgctacagtgagatcttc
cgggacttcgataattttgaactctctctggtcaactccactgtagaggagatgtttcta
gacactgactcccagtcaatcgctgagaccgtctctacggaaaccaccgacaacaccgag
ctggatcacgtgacgtgtgaggatgtctaccccccagatggtgatgacaaagatggaggt
ctatcagcccaggaagcagacctggccctgtgtcgctgtgagggaggcgtggagctggcc
ctgcagtatgccaagatgtggtgccgctacgccaaggacctgctggcctggatggaaaag
agaatcagcctggagcaagagtttgccaagaacatcgtaaaggcagcagaaacagctaag
tcctgtgtggctcagcaggacatgatgcctctgcagtacatctacaccatggccctggag
cacgacgtgaagaccagccagtctactaaacagacatcagaactgctgcagcaacgctgc
taccaggccctggcatccaagaagaatgagattgataagtggcgcagggagttcaaggat
cagtggtccagagaacagaggaggatgaatgaggcggtggcggctctgaagaaggctcgt
cagcagtacctgcagcgcagcgaggacctggagaagaccaaggcggtgacggccaaggcc
ggggacgagctcacagcgggaaacaagaccctggacaagaggaggaagtcacgtgacgac
gcgcattcaaaggtgatagaggcagagatgcagtacagacagtgtgtgtgtgaggcccat
gaccaccagggcaagctggagagattgaaggagaaaatcatagttcacacccgcaaactc
atctgccagggggacactgtgctcaaggaggccacagtgaacatgttctacttccagcgt
cagcagacggagccggttcccctgggttaccacaacctggagttgacctgcaggccgtgt
gaacccggggagccctacctgctctacatcttcaggaagagaagccaagaacaaccccta
caaaccttcaccttccaggagtttgtccctcagaacaagagtggccgtcgtaagaccagc
aaccccagctctctgcaggactccttctccctgcctgaagaaagtccagttaaacgaaag
ggctacagtgacagtgagagcataggaggcagtctggaatctctgtccagcccagcccat
ggcaacaggatgcttcttaaagccccctccacagggaccatgtcatcagacgacctggat
gagagggacatgggcaccgtcctggaaggagattgtgtggactccactccagaggggaac
ggcacggtggggaaggtacggactacgtcccgagccgcgctgacgcaccgattccggaag
atgaagagcaagatggtgaagtgcaaacagtgtgacacctacatcgtggtcaacggcatc
gagtgtgaggagtgtggcgtggcggtccacaggaagtgtctggaggtgttacagcatgag
tgtgagaacaggaagggcgttctgtttggcgtgggtttctccctgttgccccgggaccgg
cctgacgaggtgccctatgtggtccagcgctgcacggccgagatagagagcagggccctc
actctacagggggtgtatcgtatcagtgggtcgaagcctcgtatccagaagctgtgtcag
gtcttcgagacccagggggaccaagtcgacctctctgacctttcacctcatgacgtcacc
tcggtcctcaaacacttcttcaaggagcttccagagccgctgttgacctttgacctgtac
aatgacttcatcggggtgggcaaggagatccagcgtctcagtgagagggaggcggcagca
gagactcctggcatagtgaatgacctcacatataacctgagagatctgctggagagactg
cccccataccgctactacacactgcagcatatgatgcgtcaccttcacagagtatcagag
aactacgaggagaacaagatgtctcccagtaacctgggcatcgtgtttggtccgaccctg
ctccgcccgctggtgtctgtagatgtgtccatgatggccctactggagaccacctaccaa
gccctactggtggagtttctcatcacacaccaccaacacatctttgatgctccacctccc
acccccaccacccccctccctgacacccctccccgggcgatgtgttcaggggggggccag
aagactgttgctggggttgaccctgggtcccaggacccccccactagaggagcctcgtcc
aaagaacgcccccgttccctagagactcgtacaatcaagagagactcgagcgagggttat
atatctgacaagtcgtcgtccaatgaggcagtggaccagctcagccctgaagccagtgag
agagcagtcatggctgtgaggggggcatcaacagaggctgctgctctgggtgatctggta
gggggtccagagccagctgactctccctctgtggggacccagccacggagccacttcaac
aggcagcctgtcaagtaccagcgccagcccaccccgggtctccgccgctccgcgggcact
accagtgccgggcagctcggggaagaggaggaggaggaggatgaagaggaggagaggaag
agaaaccaaccgaggagcgcagacagcagccgtagcccctccccagaacctgaacctgtc
agccagagaaggagaatccttcgattggagcttccccccgagacaactgcctaccacctg
ctcagccaggctggaggccacgacccagagagccggacggaaagagagaagacacgccca
tatgaggttccacagggcaggctgcgggcagggacagtggtagtagaaacatcagtagct
gaaacaacagcagtagcggcaggagccaatccgacgccgagcaccggtgctcaggaggcg
gggcttaggagttggtctgccacattgtctcagctgaacgtgaaccagtccaataacagg
caggggtgggtgggtgagaggcggagactgagcggagaggagggtctgagtggcccggcc
cggaagatcctgtcagggctgaagctcagacgtagccactcaggactgcagcaacacttt
gtctga
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integrated database retrieval system
