Oncorhynchus tshawytscha (Chinook salmon): 112259194
Help
Entry
112259194 CDS
T05605
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00270
Cysteine and methionine metabolism
otw01100
Metabolic pathways
Module
otw_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
112259194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112259194
03032 DNA replication proteins [BR:
otw03032
]
112259194
03036 Chromosome and associated proteins [BR:
otw03036
]
112259194
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
otw02048
]
112259194
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
112259194
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
112259194
DNA replication proteins [BR:
otw03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
112259194
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112259194
Prokaryotic defense system [BR:
otw02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
112259194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
DMAP_binding
zf-CXXC
FYVE_CARP1-2
Calmod_bind_M
Rogdi_lz
Motif
Other DBs
NCBI-GeneID:
112259194
NCBI-ProteinID:
XP_042183416
LinkDB
All DBs
Position
LG09:77285951..77301620
Genome browser
AA seq
1520 aa
AA seq
DB search
MPANTSLSLPVDVRKRLEVLEKDEDGISDEDLVKEKVELVQDFLHADAQDQLSSLKAKMK
SSEISMDGYLSKVKALLGRELCVENGSHGDVVEQNCKNGKTNGSAANGDSHKEEDDDGIM
DTKEADAMKSPSAPKGKGGRKIKSDSEPKKSPGSRVTRNSVSGKQPTILSMFSKVQKCKS
EVNGVVTNGKVEEQDKIERDMEEETPEEKRFKVESDNKPVAEDATSEKMKQVAPAKTPPP
KCPDCRQYLDDSDLKLFQGDPDNALDEPEMLTDERLSLFDSNEDGFENYEELPQHKITNF
CVYDKHGHLCPFDSGLIEKNVELYFSCAVKPIYDDNPCMDGGVPAKKLGPINAWWITGFD
GGEKALIGFTTAFADYILMDPREEYAPIFAVMQEKIYMSKMVVEFLQKNPDVSYEDLLNK
IETTVPPAGLNFNRFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGV
TLGKSMLLYWRAARRQAIRHPTKIEKDSKGGPTRATTTKLVYKIFDTFFSDQIDQNEKDG
GIKRQRCGVCEVCLVPDCGKCTACKDMIKFGGSGRSKQACQKRRCPNLAVKEAEDDENIE
EEELLPVKAPSKKVSKAKTKKQSNGKLTWVGDSIKTEGKKQYYMKVCMDNEVLEVGDCVS
VSSDDPSILLYLARITSLWEDNNGKWFHAHWFCRGTDTVLGESSDPLELFLVEDCEDMQL
SYIEGKVNVMYKAPSDNWFMEGGMVEDIKVIDDDNGKNFFYQLWYEGDCARFETPPTFTP
QEDCKYNFCASCSRAEEREEQETPRVFEPIKAEDHDSKALYVLACLKGEQFRVGDNCYLP
PDAYNFSVKAASPVKRPHRKEDVDEELYPEYYRKHSDYIKGSNLDAPEPFRVGRIKEIFC
NRRSNGKADVSEVKLRLYKFYRPENTHKGAKAGYHTDINQLYWSDEEVTVNMSEVLGRCR
VEYGEDLNETVQDFSSGGPDRFYFLEAYNAKSKSFEDPPNHARSAVNKGKGKGKGKGKGK
SSSAQEPPDQEPQDPKVPKLRTLDVFSGCGGLSEGFHQAGIAETLWAIEMWDPAAQAFRL
NNPGTTVFTEDCNVLLKLVMSGEKTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT
YSKFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVL
QAGQYGVAQTRRRAIILAAAPGEKLPRYPEPLHVFAPRACSLNVVVDDKKYFSNVTRGNG
GVYRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGTQYQPILKDHICKDLSA
LVAARMRHIPLAPGSDWRDLPNIEVRLRDGTSSKKLRYTHPDKKNGRSSSGALRGVCTCS
GGVPCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVL
HPEQHRVVSVRECARSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSRAIGLEIKKCVLERI
KEHDDTNEKENGKQEKMVSD
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaatacctccttgtctctgccggtggatgtcaggaaaaggctggaggtgttg
gaaaaagatgaagatgggatctcagatgaggaccttgtcaaagaaaaggtggagttggtg
caggacttcctgcatgcggatgcccaggaccagctcagcagcctgaaagccaagatgaag
agttcagagatctcaatggatggctacctctctaaggtgaaggccctattgggacgtgag
ctgtgtgtggagaatggctcacatggggatgttgtggagcagaactgcaagaatggcaaa
acaaatggctctgcagcaaatggtgactctcacaaggaagaggatgatgatggaatcatg
gacaccaaagaggctgatgccatgaagtctccttctgcccccaaaggcaagggaggacgg
aagatcaagtcagactctgagcccaagaaatctcctggttccagggtcacaagaaactct
gtctccgggaaacaaccgaccatcttatcaatgttctccaaagttcagaagtgcaagtct
gaggtgaatggagtggttacaaatggaaaagtggaagagcaggataaaatagagcgggac
atggaggaagagacaccggaagagaagcgttttaaagtggagtcagacaataagccagtt
gcagaggacgccactagtgagaaaatgaagcaagtggctccagctaagactccaccccct
aaatgtccagactgcaggcagtatctggatgactcggacctcaagttatttcagggagat
cctgataatgcgctggatgagccagaaatgttaacagacgagcgcctttctctgtttgac
tcaaacgaagacggctttgagaactacgaagaactaccccagcacaagattaccaacttc
tgtgtttatgacaagcatggccacctgtgtccatttgactctgggctcattgagaagaat
gttgagctgtacttcagctgtgcagtcaagcccatctatgatgacaacccctgcatggat
ggtggggttcctgccaaaaagcttggtcccatcaatgcctggtggatcactggttttgac
ggaggagagaaggccttaattgggttcactacagcctttgctgactacatcctgatggat
cctagggaagagtacgcccccatcttcgccgtgatgcaggagaagatctacatgagcaag
atggtagtggagttcctgcagaagaaccctgacgtcagctatgaggacctcctcaacaag
attgagaccacagtgcctcctgctgggctgaacttcaaccgcttcacagaggacacgctg
ttgcgccacgcccagtttgtggtggagcaggtggagagctacgacgaggccggggactct
gacgagcagcccatcatcgtcaccccctgcatgagggacctgatcaagctggctggggtc
accctgggaaagagcatgctgttgtactggagagctgctagaagacaggccatccgccat
cccaccaagattgagaaggacagcaaaggagggcccactagagcgactaccaccaagctg
gtctacaagatctttgacactttcttctctgaccagattgatcagaatgagaaggatggt
ggaataaaacgccagcgctgtggtgtctgtgaggtttgcctagttccagactgtggcaag
tgtacagcctgcaaggacatgatcaagtttgggggtagtggtcgcagcaagcaggcttgc
cagaagaggagatgccccaacctggcagtaaaggaggctgaggatgatgagaacatagag
gaagaagagttgttgcctgtaaaggccccttcaaagaaggtgtccaaggccaagactaag
aagcagagcaatggcaagctgacctgggttggagactctatcaaaactgaggggaagaag
cagtactacatgaaggtgtgtatggacaatgaggtgctggaggtgggagactgcgtttct
gtcagctctgatgacccatcaatcctgctctacctggccaggatcacatccctgtgggag
gataacaatgggaagtggttccatgcccactggttctgccgcggtacagatactgtactg
ggggagtcctctgaccctctggagttgttcctggtcgaggactgtgaagacatgcagctg
agctacatagagggcaaggtcaacgtcatgtacaaggccccttcagacaactggtttatg
gagggtggcatggtagaggacatcaaggtgattgacgatgacaatgggaagaatttcttc
taccagctgtggtatgaaggagactgtgcccgctttgagaccccgcccaccttcacaccc
caagaggactgcaagtacaacttctgtgccagctgtagtagggctgaggagagggaagaa
caggagactcctcgggtgtttgaacccataaaggccgaggaccacgactccaaggcctta
tatgttctggcctgcctgaagggagagcagttcagggtgggagacaactgctacctaccg
cccgacgcatacaacttcagtgtgaaggcagccagtccagtgaagcgtcctcacaggaag
gaggatgtggatgaggagttgtacccagagtactacaggaagcattcagactacatcaag
ggctccaacctggatgcccctgagcccttcagagtgggacgcatcaaggagatcttctgc
aacagacgcagcaacgggaaggctgacgtgtctgaagtcaaactgcgcttgtacaagttc
tacaggcctgagaacactcacaagggggcgaaggcaggttaccacacagacatcaaccag
ctgtactggagtgacgaggaagtgacagtcaacatgtcagaggtgttgggccggtgtcgt
gtggagtacggagaggacctgaatgagaccgttcaggacttctcctcaggtggacctgac
cgcttctacttccttgaggcttataatgccaagtccaagagttttgaggacccacccaac
catgcccgctctgctgtgaacaagggcaaggggaaagggaagggcaaaggtaaagggaag
tcgtcttctgctcaggagcctccagaccaggagcctcaggaccccaaggtgcccaagctg
cgtaccctggacgtgttctctggctgcggtgggctctctgaaggcttccaccaagctggt
attgctgagactctgtgggccatcgagatgtgggacccagcagcccaggccttcagactg
aacaacccgggcaccacagtgtttacagaggactgcaatgtgctgctaaagctggtgatg
tctggagagaagactaactccctgggccagcggctgccccagaagggagacgtggagatg
ctgtgtggaggccctccctgtcaaggcttcagcggcatgaaccgcttcaactccagaacc
tactccaaattcaaaaactctctggtggtgtcttatctcagttactgcgactactacaga
cccaagttcttcctgcttgagaacgtgaggaactttgtctccttcaaaagctccatggtc
ctgaaactgactctgcgctgtcttgtccgcatgggctatcagtgcacattcggagtcctt
caggctgggcagtacggtgtggctcagacgcggcgcagggccatcatcctggcggccgcg
cctggggagaagcttcctcgctacccagagcccctgcatgtgttcgctccccgggcatgc
tctctcaacgtggtggtggacgataagaaatatttcagcaacgtcacacgaggtaatggc
ggtgtgtacaggaccatcacagtcagggacaccatgtctgacctgccagagatccgcaac
ggagcgtctgctctggagatttcctacaacggagagccccagtcctggttccagaggcag
atcagaggcacacagtaccagcccatcctcaaagaccacatctgcaaggacttgagtgcc
cttgtagctgcccgtatgaggcacatccccctggcgcctggctctgactggagggacctg
cccaacatcgaggtccggctgagagatgggacctcatccaagaagctccgctacacccac
cctgacaagaagaatggtcgcagcagctctggagcactgaggggtgtttgtacttgttca
ggaggggtgccctgtgaccctgctgacaggcagttcaacacactgatcccctggtgtttg
ccccacacggggaaccgccacaatcattgggctggcctctacggcaggctggagtgggac
ggcttcttcagcaccaccgttaccaaccctgagcccatgggcaagcagggtcgtgtcctg
catccagagcagcacagagtggtcagtgtgagggagtgtgcacgctctcagggcttccct
gatacctaccgcttcttcggaaacgttctggacaaacacagacaggttggcaacgctgtt
cctccaccactctccagagccattggactagagatcaagaagtgtgtcctagagcggatc
aaggagcatgacgatacaaatgagaaagagaatgggaagcaggagaagatggtgtcggac
tag
DBGET
integrated database retrieval system
