Oncorhynchus tshawytscha (Chinook salmon): 112259261
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Entry
112259261 CDS
T05605
Name
(RefSeq) glial fibrillary acidic protein-like
KO
K05640
glial fibrillary acidic protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259261
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112259261
Membrane trafficking [BR:
otw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112259261
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
112259261
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Myosin_tail_1
TPR_MLP1_2
GAS
DUF1664
TolA_bind_tri
DUF6447
CENP-F_leu_zip
BLOC1_2
Fib_alpha
T2SSF
VPS11_C
Motif
Other DBs
NCBI-GeneID:
112259261
NCBI-ProteinID:
XP_042183755
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All DBs
Position
LG09:complement(85257232..85264360)
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AA seq
457 aa
AA seq
DB search
MESQRVLSSYRKRFGPQGAGSVGGGVRLSSLSSSRFSLHGSPRHMTHSSTISHLSLGSAG
GALLLGTPGNRLDFSADSLLKAQYRETRTNEKVEMMGLNDRFASFIEKVRFLEQQNTVLV
TELTQLRGKEPSRLGDIFQEELRELRRQVDGLSAGKARLEIERDNMAADVATLKQRLQDE
MVLRQDAESNLNAFRQDVDEASLNRVQLERKIDALQDEIAFLKKIHEEELRELQEQLIAQ
QVHVDVDVSKPDLTAALRDIRVQYESVASSNIQETEEWYRSKFADLTDAATRNADALRLA
KQEGNEYRRQLQAMTCDVEALRGTNESLEQQLREMEDRFSVETAGYQDMVGHLEEEIQTL
KEGMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITVPMQSFSNLQFRETSMDTKF
SPEAHVKRSIIVRTVETRDGEIIKESTAERKEIPDSP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcagagagtcctgtcatcttacaggaagcgtttcgggccccagggggccggc
agcgtgggtgggggcgtgcggctcagcagtctctcctccagccgcttctccctccatggg
agtccccgccacatgacccactccagcaccatttcccatctctccctggggtcggctgga
ggggccctgctcctggggacccctgggaaccggctggacttctcggctgactcactcctc
aaggcccaataccgggagacgcgcaccaacgagaaggtggagatgatgggtctgaacgac
cgcttcgccagctttatagagaaggtgcgcttcctggagcagcagaacacggtgctggtg
acggagctgacccaactgagggggaaggagcccagccgtctgggggacatcttccaggag
gagctgagggagctgcgcaggcaggtggacggactcagcgctgggaaggcccggctggag
atagagagggacaacatggctgctgacgtggccacgctcaaacagagactgcaagatgag
atggttcttagacaggatgcagagagcaatttgaacgcctttagacaggatgtggatgag
gcgtctctgaaccgtgtccagttggagaggaagatagacgcactgcaggatgagattgcc
ttcctcaagaagatccacgaggaggagctgcgtgagctgcaggaacagctgatagcccag
caggtccatgtggatgtggacgtgtccaagccagacctgaccgctgctctgagggacatc
cgggtccagtatgagtccgtggcctcctcgaacattcaggagacggaggagtggtaccgc
tccaagtttgccgacttgaccgacgcagctactcggaatgcagacgccttgcgattggcc
aaacaggagggcaacgagtaccgccggcaactccaggccatgacctgtgatgtggaggcg
ctccgtggaacaaacgagtctctggagcagcagctgcgtgagatggaggaccgtttctcc
gtggagacggctggttaccaggatatggtgggtcatctagaggaggagatccagactctg
aaggaggggatggccagacacctgcaggagtaccaggacctgctcaacgtcaaactggcc
ctggacatagagatcgctacctacaggaagctgctggagggagaggagagcaggatcact
gttccaatgcagagcttctccaacctgcagttcagagagaccagtatggacactaagttc
tctccagaggcccatgtcaagaggagcatcatagtgcggactgtggagactagagacggg
gagatcattaaggagtctacagctgagaggaaggagattcctgacagtccttaa
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