Oncorhynchus tshawytscha (Chinook salmon): 112259264
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Entry
112259264 CDS
T05605
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112259264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112259264
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112259264
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
112259264
NCBI-ProteinID:
XP_042183766
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Position
LG09:85368604..85442820
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AA seq
374 aa
AA seq
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MSRVPSPPPPADMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NTAEILILADLHSADQLKTQAVDFINYHAAEVMETSGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagtcccgagtccccctccccccgcggacatgtccagcggccctgtggctgag
agctggtgttacactcagatcaaagtggtgaagttctcttacatgtggaccatcaacaac
ttcagcttctgccgtgaggagatgggcgaggtcatcaagagctccaccttctcttcggga
gccaatgacaagcttaaatggtgtttgcgtgtaaatcctaaaggcctggacgaggagagt
aaagactacctgtccctctacctgctcctggtcagctgtcccaagagcgaggtgcgtgcc
aagttcaagttctccatcctcaatgccaagggagaggagacaaaggctatggagagccag
agggcataccggtttgtccaggggaaggactggggctttaagaaattcatcaggagagac
ttcctgctggacgaggccaatgggctgctgcctgacgacaagctcactctcttctgtgag
gtgagtgtggtgcaggactcggtgaacatctcaggtcagaacactatgaacatggtgaag
gtgccagactgcaggctggccgatgagctgggagggctttgggaacactcccgcttcact
gactgctccctgtgtgtggcgggacaggagttccaggcacacaaagccatcctggcagcc
cgatcgccagtgttcagtgccatgtttgaacatgagatggaggagagtaaaaagaaccgt
gtggagatcaacgatgtggagcccgaggtgttcaaggagatgatgtgcttcatctacacg
ggtaaagcccccaacctggacaagatggctgatgaccttctggctgcggctgacaagtat
gctctggagagactgaaggtgatgtgtgaggatgctctgtgcaccagtctgtctgtggag
aacactgcagagatcctcatcctggcagacctgcacagtgcagaccaactcaaaacacag
gctgtggacttcatcaactaccatgctgctgaggtgatggagacgtctggctggaagtcc
atggtggcatcccacccccacctggtggctgaggcctatcgctccctggcctcggcccag
tgccccttcctgggacccccacgcaaacgcctcaaacagtcctag
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