Oncorhynchus tshawytscha (Chinook salmon): 112259323
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Entry
112259323 CDS
T05605
Name
(RefSeq) tectonin beta-propeller repeat-containing protein 1 isoform X1
KO
K17988
tectonin beta-propeller repeat-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259323
03029 Mitochondrial biogenesis [BR:
otw03029
]
112259323
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112259323
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
112259323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hyd_WA
Tectonin
Pex24p
Motif
Other DBs
NCBI-GeneID:
112259323
NCBI-ProteinID:
XP_024289808
LinkDB
All DBs
Position
LG27:885591..916328
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AA seq
1221 aa
AA seq
DB search
MPVSLLWAVDVYGRVYSLSTRGQQWEQCRDAVLEFKRVTAVQQCCWGIACDHHIYLNVHS
SDVPIRYQEETFENQRWNPMDNFSDHLLPSDRWQWSNITGLEHQPLDSFFLPSTNWEWEG
DWYIDENFGGEPTEKEGWTYAIDFPATYTKDKKWNSCVRRRRWIRYRRYKATDTWAKIPS
EGHSGPLPDPFNDISCGGWEISEEPRGRLSLWAVSLQGKVWFREGIHHHSPEGDGWEEVS
LPGEVVQISCGPGDLVWAVLWEGQLIVREGITRDCPRGSSWVVVDSPNPEAGAIHVAVGD
NVVWAVTKDNKIWYRRGINSYNPRGSGWIGMIGEMVMINVGLNDQVWGISCEDRAVYFRQ
GVTSSELSGKAWKAVNVPRDGDIRSHSSASSSSLHSAGCFFSGEVRAQSVMSEDSDTKNG
PQRAVLEVGACPSSPPPDPPPVDPDAPKPRIPKVTSDSFISEMLSDRKVKREGPTTAVTA
GPSIPEEEASLREADAKSPPLALVLSPSLSGGPGDPQWSNVDLEETQTHLAVGPAGVRGD
TADTCSLSSVATYTLCQEEPYGADEHPLWAWVSGGGCGVDCHSQLNWFNSATALSSSVQS
MSLSISPAQTAAWRKQIFEQLSERSKREMDNFKHYEQAIEQSQSVWVKKGAMQWWRDWKP
HKWVDVRFALEQFSGPEGNQDGILFLYYNFNEEKKYLHAFINEVTILVPVLNDSKHTFAV
YTAERTKQRWPIRLAAATELEMHDWLALLSVSCCDSRGIQGPPSKQALWSVTCKGDVFVC
EPSPSLEACPYPTPCDQMFWHQVGGHLRLVECNSLGVVWGVGYDHTVWVYTGGYGGGFLQ
GLASSTDNIYTQTDVKCVYIYENQRWNPVTGYTNRGLPTDRYMWSDATGLQECTKANTKP
PSPHWTWVADWAIDYGISGGTDREGWQYAADFPTSYHGHKTLKDFVRRRRWARKCKLTTT
GPWQEVPPIPLSDVTIIPCGAQSIVEPIPLWAISNKGDVLCRLGVTLLTPAGTSWLHVGT
DQPFKSISIGGANQVWAIARDGSAFYRGSVTAQSPSGDCWYHIPSPVRQKLQQVSVGRTS
VYTVDQHGNLWFRQGLTPSCPQGSSWEHISNNVRKVSVGPLDQVWIIADKVQGSHSLSCG
TVCHRLGVQPMEPKGQSWDYGIGGGWDHITVRGNSFEAPRVRMPSLTPSLTASLTDPLRT
HPPRRPLSFRNTEENGNAVRC
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtccctgctgtgggcagtggatgtgtatgggcgtgtgtacagcttgtccacc
agagggcagcagtgggagcaatgtcgtgatgctgtgttagagtttaaaagggtgacggcc
gtgcagcagtgttgctggggtatcgcctgtgaccatcacatctacctgaatgtccactct
agtgatgttcccatacgctaccaggaggagacattcgagaaccagcgatggaatcccatg
gataacttctcggatcacttgttgccgagcgaccgctggcagtggagtaacatcacagga
ctggaacaccaaccccttgacagcttctttcttccctcgaccaactgggagtgggagggg
gactggtacattgacgaaaactttggaggagagcccacagagaaagaaggttggacctat
gccatagacttccctgccacctacaccaaagacaagaagtggaactcatgtgtccgtcgc
aggcgatggatccgctacaggaggtacaaggccacagacacctgggccaagatcccatca
gagggtcacagtggtccccttccagacccctttaatgacatcagctgtggaggctgggag
atcagtgaggagcccagggggaggttgtctctgtgggccgtctctctacagggcaaggtg
tggtttcgtgagggtatccaccaccacagcccagagggggatggctgggaggaggtgtct
ctgcctggggaggtggtgcagatcagctgtggtccaggggaccttgtctgggccgtgctc
tgggagggacaactcatcgtcagggagggcatcaccagagactgcccacgaggctcctcc
tgggtagtggtggactctcccaacccagaggccggggccatccacgtagctgtgggggac
aacgtagtctgggctgtcaccaaggacaacaagatatggtacagacgtggcatcaactcc
tataacccccgtggttcaggctggatcgggatgatcggggagatggtcatgatcaacgtg
ggtctcaacgaccaggtgtggggtatcagctgtgaggaccgagcagtgtatttccgtcag
ggtgtgacctccagtgagttgagtggtaaagcctggaaggctgtcaacgtgccccgagac
ggagacatcaggtcccactcctccgccagcagtagcagtctgcacagtgctggttgtttc
ttcagtggagaggtgcgagcacagtctgtgatgagtgaagactcagacacaaagaacggt
ccacagagggcagtcctagaagtaggggcctgtccctcctcccctccccccgatccccct
cccgttgaccccgacgcccccaaaccacgcatccccaaggtcaccagcgacagcttcatc
tccgagatgctctctgaccgaaaggtcaaacgggaggggcccaccactgccgtcaccgcc
ggtccctctatcccagaagaggaggcctctcttcgggaagcagatgccaagtccccccct
ctggccctggttctgtcccccagcctgtctggagggcctggggacccccaatggagtaac
gtggacctagaagagacccagactcacctggctgtggggcctgctggggtgagaggggac
acggctgacacctgtagcctgtcctctgtggccacctacaccctgtgtcaggaggagccg
tatggggcggatgaacatccactctgggcatgggtcagtggaggaggctgtggtgtggac
tgtcactcccagctcaactggttcaactctgccacagccctgtcatcatcagtccagtcc
atgagtctgtccatcagtccagcccagacagctgcctggcggaaacagatctttgagcag
ctcagcgaacgctccaagagagagatggacaactttaaacactacgaacaggccatagaa
cagtcccagtctgtatgggtgaagaaaggggccatgcagtggtggagggactggaagccc
cataagtgggtggacgtgaggtttgccctggagcagttctcaggaccagagggaaaccag
gatggcattctcttcctctactacaacttcaacgaggagaagaagtacctgcatgcattc
atcaacgaggtgactatcttggtgccggtgctgaatgactccaaacacacgtttgccgtc
tacacagcagagaggaccaaacagaggtggcctatcagattggctgctgccaccgagctg
gagatgcacgactggctggccctgctgagtgtgtcgtgctgtgactcccgggggatccag
ggtcccccctctaaacaggccctctggtcagtcacctgtaaaggagatgtctttgtctgt
gagccttcacctagcctggaggcctgtccctaccccacaccctgcgaccagatgttctgg
catcaggtggggggccacctgcgtctggtggagtgtaacagtctgggggtggtgtggggg
gttggctacgaccacactgtctgggtctacactggcggctatggagggggattcttgcag
ggtctggccagcagcacagataacatctacacccagacagatgtgaagtgtgtctacatt
tatgagaaccagaggtggaacccagtcacaggatataccaacagaggcctcccaacagac
cgttacatgtggagtgatgcaacaggactgcaggagtgtaccaaggccaacaccaagcct
ccatcccctcattggacatgggtggcagactgggccattgactacggtatctctggaggg
acagacagagagggttggcaatatgcagctgatttcccaacgtcgtatcatggccacaag
accttgaaggactttgtccgtcgtaggcgatgggccaggaagtgtaaactgaccaccaca
gggccgtggcaagaagtcccacccatcccgttgagtgacgtgaccatcatcccttgtgga
gctcagagcattgttgaaccgatccctctctgggccatcagtaacaagggagacgtgctc
tgtagactgggagtcaccctactgacgcctgctgggacgtcatggctccatgtgggcaca
gaccagccctttaagtctatctccattggtggggccaaccaggtgtgggccattgccagg
gatggctctgccttctacaggggctccgtgaccgcacagagcccttcaggagactgctgg
taccacatcccctctccagtcaggcagaagctccaacaggtgtctgtagggaggacgtca
gtctacacagtggatcaacatggtaacctgtggttcagacagggcctgactcctagctgc
ccccagggatcgtcatgggaacacatctctaacaatgtacgcaaggtctccgtaggacct
ctggaccaggtgtggatcatagctgacaaggtgcaaggcagccacagtctgagctgtggg
acagtctgtcaccgtctgggggttcagcccatggagccaaagggacagtcgtgggactat
ggcatcgggggtggctgggaccacatcactgtgagagggaactccttcgaggctccccgt
gtccgtatgccctccctgacaccctcccttaccgcctccctgacggaccccctccgcacc
catccaccccgcagaccgctctccttcaggaacacagaggagaacgggaacgctgtcagg
tgttaa
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