Oncorhynchus tshawytscha (Chinook salmon): 112259407
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Entry
112259407 CDS
T05605
Name
(RefSeq) ATP-binding cassette sub-family C member 8-like isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112259407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112259407
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
112259407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
nSTAND1
RsgA_GTPase
DEAD
TraD_N
Motif
Other DBs
NCBI-GeneID:
112259407
NCBI-ProteinID:
XP_042187073
LinkDB
All DBs
Position
LG01:11253212..11388207
Genome browser
AA seq
1594 aa
AA seq
DB search
MSLAFCGNENNSLAYNVDRGVLNNGCFLDALNVVPHIFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNLRWLLTFILLFVLVCEIAEGIVSDGFTQSLHLHLYMPAGLAFMAGITS
IIYYHNIETSNFPKLLLALLFYWVLAFLMKTIKFAKYTEHSVGLRQLRYCITGLLALLYG
LLLAVEINVILGRRYLCFTEATEVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNTFITAA
HCRPIDLKVIGKLPIAMRALTNYLKLRKAFESQRVKRPLGSMPQGPKWIWRALRQAFGRP
LIISITFRFLADLLGFAGPLCISGIVHHISKDNRTIQPPIKLLGVYFISSQEFLANAYVL
AVLLFFALILQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSNMSMGELTVGQIC
NLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATVIAVLAPVQYFVA
TKLSQAQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCHSVEETRDKELTSLQTFAL
YTSISIFMNAAIPIAAVLTTFVVHVHISEEADLSPAVAFASLSLFHILVTPLFLLSSVVR
STVKALVSAQKLSEFFSSDEIGDEQEPNATMPTGPSNHKTIPSCPRNHNNKYQAVPLKVV
NRKRHPRDDWNNYSHEGGNPPPQEGDQDLCIRITSGYFTWTDGTPTLSNINSKVPFGQLT
MIVGQVGCGKSSLLLAALGEMQRVSGTVTWNILPSLDSERDDSPTSDKDAADDGDIQKRG
SVAYASQKPWLLNATLVENITFEMPMIKPRYKAVIEACSLQPDIDILPQGDLTEIGERGI
ILSGGQRQRIGVARALYQQTNVVLLDDPFSALDIHLSDHLMQEGICKLLREEKRTVVLVT
HKLQYLPHADWIIAMKDGTIQTEGTLKDIQNSDPKLFEQWKTLMHRQDGEFEKETVAESM
TVLERKNLRRAMYSKEAAKTEEEHEEESVESEVDDSLSQAMRHRTTIPWRSCGVYLSSAG
LLLPLLLLSQLFKHTLMVAIDYWLAHWTSHVITAKMDATGRNCTVAQECGFSHSWYLSVF
SVLCCLGIVLCLVTSVAVEWTGLRVAKELHHNLLSKIILAPMRLFETTPLGNILNRFSSD
TNTIDQHIPATLECLSRSTLLCVSALGVISYVTPVFLIALVPLAIACYFIQKYFRVASRD
LQQLEDSTQLPLLSHFSETVEGLTTIRAFRYESRFRQRLLEYTDANNIASLFLTAANRWL
EVRMEYVGACVVLIAAVASISNSLYNHLSTGLVGLGLTYALMVSNYLNWMVRNLADMEVQ
LGSVKRINGLLKTEPENYEGLMAASQVPDGWPRQGEIQIQNLSVRYDTTLKPVLKQVNAH
ISPGQKVGICGRTGSGKSSFSLAFFRMVDMFEGRIIIDDIDIAKLPLQTLRSRFSIILQD
PILFSGTIRFNLDPEMKATDDMLWEALEIAQLKPVVKTLPGGLDAMVTEGGENFSQGQRQ
LFCLARAFVRKSSILIMDEATASIDMATESILQKVVMTAFADRTVVTIAHRVHTILNADL
VIVMKRGIILEYDRPQALLEKEDSVFAAFVKADK
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcattctgtggaaacgagaacaactcgttggcatacaacgtggaccgcggc
gtcctcaacaacggctgcttcctggacgcgctcaacgtggtgccgcacatcttcttgctc
ttcatcactttccccatcctcttcattggctggggcagccagagctccaaggtgcacatc
caccacagcacctggctgcacttccctggtcacaacctgcgctggctcctcaccttcatc
ctcctctttgtcctggtctgtgagattgctgagggcatcgtctccgatgggttcacccag
tccctccacctgcacctgtacatgcctgcaggcctggccttcatggctgggatcacctcc
atcatctactaccacaacatagagacctccaacttccccaagctactgctagccctactg
ttctactgggtcttggcctttctgatgaaaaccatcaagttcgccaagtacacggagcac
agcgttggcctgagacaactccgctactgcatcacaggactcctggccctgctctacgga
ctactactggctgtggagatcaatgtcatactgggcaggcgctacctgtgtttcactgag
gctacagaggtgaagcctccagaggacttgcaggacctgggggttaggttcctgcagccc
ttcgtcaacctgctgtccaaggccacctattggtggatgaacacattcatcacggcagcc
cactgccgccccatcgacctcaaggtcatcggcaagctgcctatcgctatgcgagccctc
accaactacctgaagctccgcaaggctttcgagagccagagggtaaagaggcctctgggc
tctatgccgcagggccctaagtggatttggagggccctacgccaggcgtttggacggccc
ctcatcataagcatcaccttccgcttcctggctgaccttctgggcttcgctgggcccctc
tgtatctctggcatcgtccatcacatcagcaaggacaaccgcaccatacagcccccgata
aagctgctgggggtctactttatctcctctcaagagttcttggcgaatgcctacgtgcta
gccgtgctgctgttcttcgccctcatcctgcagagaaccttcctccaggcctcgtattat
gtggctattgagactggcatcaatttacgaggggctatacagactaagatctacaataag
atcatgcggctgtgcacctccaacatgtccatgggggaactgaccgtaggacagatttgt
aacctggtggccatagataccaaccagctcatgtggttcttcttcctctgtcccaacctg
tgggccatgccagtccagatcattgtgggggtgattctactctactacctcctggggatc
agtgccttgatcggggccacagtcatcgctgtcctggcccctgtccagtactttgtggcc
accaagctgtcccaagcacagaagagcactctggagtactccagtgagcggttgaagaag
accaatgagttgctgcggggaatcaagcttctgaagctgtacgcctgggaacacatcttc
tgtcacagtgtggaggagaccagggacaaggagctcaccagtctgcagacctttgcccta
tatacgtccatatctatattcatgaacgcagccatccctatcgcagctgtcctgaccacg
tttgtggtccatgtgcacatctctgaggaggctgacctgtcccctgctgtagcttttgcc
tccttgtccctgttccacatcctggtcactcctctcttcctgctctccagtgtggtacgg
tccacggtcaaggccctggtcagtgcccagaagctgagtgagttcttcagtagtgatgag
attggagatgagcaggagccaaatgccaccatgcccacgggccctagcaaccacaaaacc
attccctcctgccccagaaaccacaacaacaagtaccaggcagtgcctctgaaggtggtg
aacaggaagagacatcccagggacgattggaacaactacagccatgagggaggcaaccca
cccccccaggagggagaccaagacctttgcatcaggataaccagtggatatttcacctgg
acagatgggactcccaccctgtctaacataaacagcaaggttccctttggtcagctgact
atgatcgtgggccaggtgggttgtgggaagtcgtccctgttgctggcagctctgggagaa
atgcagagagtctctgggactgtcacctggaacattttgcccagcctggactcagagaga
gatgacagccccacatcagacaaagatgctgctgatgatggagatatccagaagagaggc
tctgtggcctacgcttcccagaagccctggctgctcaatgcgacgctagtggagaacatc
acctttgaaatgcccatgatcaaacccaggtacaaggctgtcattgaggcgtgttccctg
cagccggatattgacatcctgccacagggagacctgacggagattggagagaggggtata
attctgtcaggagggcaacgccagcgtataggtgtagccagagccctgtaccaacagacc
aatgtggtcttactggatgacccgttctcagcgctggacattcacctgagtgaccacctg
atgcaggagggcatctgcaaactgctgagagaagagaagaggaccgtggtactggtcact
cacaaactacagtacctaccacatgctgactggatcatagcgatgaaggacggcaccatt
cagaccgaggggactctgaaagacatccagaactctgatcctaagctgtttgaacagtgg
aagaccctgatgcaccggcaggacggggagtttgagaaggagacagtggctgagagtatg
acggtgttggagcgtaagaacctgcggagggcgatgtactccaaggaagctgccaagact
gaggaggagcacgaagaagagtctgtggaaagtgaggtggatgacagcctgtcccaggcc
atgcgtcaccgcaccaccatcccctggcgctcctgtggggtctacctgtcctctgcaggg
ctcctcctgccgctgctcctcctatcacagctcttcaaacacaccctcatggttgccatc
gactactggctggcccactggacctcccacgtcatcactgccaagatggacgccaccggg
agaaactgcaccgtcgctcaggagtgtggtttcagccactcgtggtacctgtcagtgttc
agtgtgctgtgctgtctgggcatcgttctgtgtctggtcacctctgtggctgtagagtgg
acaggcctgagagtggccaaagaactacaccacaacctgctcagcaagatcatactggca
cctatgaggctgtttgagaccactcccctgggtaacatcctcaacaggttctcctctgac
accaacaccatagaccagcacatccctgccaccctggagtgtctgagtcgctccaccctg
ctgtgtgtgtcggcgctgggggttatctcctatgtgacccctgtgttcctcattgccctg
gtgcccctggccatcgcctgctacttcatacagaagtacttccgggttgcctccagggac
ctccagcagttggaggatagtacccagctccctctcctgtcccacttctcagagacagtg
gagggcctcaccaccatccgggcattcaggtacgagtccaggttcagacagaggttattg
gagtatactgatgccaacaacatcgcatctctcttcctcacagcagccaatcgctggcta
gaggtccgcatggagtatgtaggagcctgtgttgttctgatagcagccgtggcctccatc
agcaactctctgtacaaccacctctccactggcctggtgggactcggactcacctacgca
ctcatggtatccaactacctgaactggatggtgcggaacctggcagacatggaggttcag
ctgggttcagtcaagaggatcaacggcctgctgaagactgagcctgagaactacgaggga
ctgatggctgcatctcaggtgccggatggctggccacggcaaggagagattcagatccag
aacctgagtgtgcgttacgacaccaccctgaaacctgtcctcaaacaagtcaacgcacac
atcagccctggacagaaggtggggatctgtggtaggacaggaagtgggaagtcttctttc
tccttggccttcttccgcatggtcgacatgttcgaggggcgtatcatcatagatgacatt
gacatcgccaagctgcctctgcagactctgaggtctagattctccatcatcctccaggac
cccatcttattcagcggaaccatccggtttaacctggacccagagatgaaggctacagac
gatatgctgtgggaggctctggagatcgctcagctcaaacctgtagtcaagactttacca
ggaggactggacgccatggtgacggagggaggggagaacttcagccagggccagagacag
ctcttctgtctggccagagccttcgtcaggaagtctagcatcctcatcatggatgaagcc
acagcctctatagacatggccacggagagcatcctgcagaaggtggtgatgactgccttc
gctgacagaacagtggttaccatagcacatcgtgtccacaccatcctgaatgcagacctg
gtgatagtgatgaagagagggatcattctagaatacgacagaccccaggcactgctggag
aaagaggacagcgtctttgcagcattcgtcaaggcggacaagtga
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integrated database retrieval system
