Oncorhynchus tshawytscha (Chinook salmon): 112259419
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Entry
112259419 CDS
T05605
Symbol
si:dkey-208k4.2
Name
(RefSeq) P43 5S RNA-binding protein-like
KO
K09191
general transcription factor IIIA
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112259419 (si:dkey-208k4.2)
03021 Transcription machinery [BR:
otw03021
]
112259419 (si:dkey-208k4.2)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112259419 (si:dkey-208k4.2)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
112259419 (si:dkey-208k4.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
TFIIIA_zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
Ta0938
Phage_zn_bind_2
Motif
Other DBs
NCBI-GeneID:
112259419
NCBI-ProteinID:
XP_024289890
LinkDB
All DBs
Position
LG09:complement(72925779..72929677)
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AA seq
385 aa
AA seq
DB search
MNGVAHKQDSDPRKQLFNCNHADCAATFQREWRLKEHETVHTGAQPFQCNVADCGRRFSR
KSHLSRHALGHTGVKQFRCTFVGCTKAFFKADKLKRHVHYAHGEKDKYFKCNFPNCLLTF
KKRRVYKLHLKEHGISSNFKCSKRGCGVTFDTNVARKAHEKKHAGYRCTQPECNHFEQTW
GKMHKHMAKHPATFTCKLCQKVFKHVDSLRRHKRTHALQKPVLLCPSSGCKAYFSTTFNL
QHHIRKAHLQLLKYHCCFPDCPRTFAMRESLSRHLAHHDPDANPEKKKRKRPKKAWQKRL
EGHQLPLVEDDLRRLFALRMRVSRRAKVEVNLSGLFNERKIPHFVDSEVNLRDLFSIKPP
HPSCPAERVPVEVTHPEVTDQRLNL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggtagcccacaaacaggactcggatcctcgaaaacagcttttcaactgcaac
catgctgattgtgcggcgacgttccaacgggagtggcgtttgaaagagcacgagacagtg
cacacgggagcgcaaccttttcaatgcaacgtggctgattgtggccgtcgtttctcacgg
aaatctcacctgagccgccacgcacttggccacaccggggtgaaacaattcagatgtacc
tttgtgggttgcacaaaggctttcttcaaagcggacaagttgaagagacacgtccattat
gcccacggagaaaaggacaagtactttaagtgcaattttccaaattgcttattgacattc
aagaaacggagggtgtataaattacatttgaaggagcatggaatatcttctaatttcaaa
tgttcgaagagaggatgtggagtcacgtttgacaccaatgtcgctcgcaaagcccatgag
aagaaacatgcagggtaccgctgcacacagcctgaatgcaatcattttgaacaaacctgg
gggaaaatgcacaaacacatggctaaacacccagccacattcacctgtaagctgtgccag
aaggtgtttaagcatgtcgactctctgcgtagacacaagcgaacccacgccctgcagaag
cctgtcctgctgtgccccagcagtggatgcaaggcctacttctccactacctttaacttg
cagcaccacatccgcaaggcccacctgcagctcctcaagtaccattgctgcttccccgat
tgccccagaacctttgccatgcgggagagcctaagcagacacctggctcaccatgaccca
gatgccaaccctgagaagaagaagcgcaagcggcccaagaaggcctggcagaagcgtctg
gaaggccaccagctgcccctggtggaggacgacctgcggcgcctctttgccttgcgcatg
agggtgtcacgacgggccaaggttgaggttaacctctcaggcctcttcaacgagcgcaag
atcccccactttgtcgactcggaggtcaacctgcgtgacctcttcagcatcaagccccct
cacccctcctgccctgcagagcgagtccctgtggaggtcacccacccagaggtcactgat
caaaggttgaacttgtag
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