Oncorhynchus tshawytscha (Chinook salmon): 112259421
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Entry
112259421 CDS
T05605
Symbol
hcrt
Name
(RefSeq) orexin
KO
K05246
hypocretin (orexin) neuropeptide
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112259421 (hcrt)
04081 Hormone signaling
112259421 (hcrt)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112259421 (hcrt)
Cytokines and neuropeptides [BR:
otw04052
]
Neuropeptides
GPCR binding
112259421 (hcrt)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orexin
Motif
Other DBs
NCBI-GeneID:
112259421
NCBI-ProteinID:
XP_024289893
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All DBs
Position
LG09:complement(73440429..73443150)
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AA seq
151 aa
AA seq
DB search
MRFNTKHLTTAPGMDTACSTTKKLKVLILLLLVSHLACDAQGVANCCKQKSHSCRLYVLL
CRSGNGMGTRGPLTDDAAAGILTLGKRKETDERRFQNRLNQLLHGSRNQAAGILTMGKRT
EDTAEPLMCLFPILETAPTTTAELVLQLPFK
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcaacacaaagcatcttactacagccccagggatggacacagcatgctcaacc
accaagaaactcaaggttctcatcttgttgctactcgtctctcatctggcctgtgacgct
cagggggttgccaactgttgcaaacagaaatcccactcctgccgtctttacgtcctgctc
tgtcgctcaggtaatgggatggggacaaggggacccctcactgatgacgcagccgctgga
atcctcacactcggtaaacggaaagaaactgatgaacgccgcttccagaaccggttgaat
cagctactccatgggtcacggaaccaagcggcgggaatcttgacgatggggaagaggacc
gaagacacagcagaaccgctcatgtgcttgtttcccattttagagacggcccccactacc
acggccgagttggttttacaactaccattcaagtga
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