Oncorhynchus tshawytscha (Chinook salmon): 112259439
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Entry
112259439 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112259439
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112259439
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112259439
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112259439
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112259439
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
112259439
NCBI-ProteinID:
XP_024289917
LinkDB
All DBs
Position
LG27:1079964..1106308
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AA seq
1233 aa
AA seq
DB search
MTIVDRSSEKSDLESVGCKRSGSLNFPGGDGNGMDSGCSSWGAGGPSSSDTPRVKTGGCM
GPTPGATVNSSSADRPKEQVVLTSGDGIALPQKVLFPAERLSLKWNQVHRIGSGLQNLGN
TCFLNSALQCLTYTAPLTNYMLSREHSKTCHEPGFCMMCTMQNHITQVFANSGNVIKPIG
VLNELKRIAKHFRFGSQEDAHEFLRYTVDAMQKSCLPLNKLDRQTQATSFIHQVFGGYLR
SRVKCFNCKAVSDTFDPYLDVALEIKTAPSITKALEQFVKPEQLDGENAYRCAKCKKMVP
ASKRFTIHRSANVLTISLKRFANYNGGKIAKDVRYAECLDLRPFMSQSHGEPQVYVLYAV
LVHSGFSCHAGHYYCYVKASNGQWYQLNDSSVLVSDIRSVLNQQAYVLFYIRSPDLKNGG
DYNHTCRTPGPLGQLSPRPILTPRVNIGPRHTSTGFIGPQLPPHMAKNIFQVNGNGSLRD
YPSGSKPSTSSDNSMGKTSYNPLATSPSHPLNRPTGIPDPAKRQKLSFFIGQGKQIRPSS
STYAQPSSSSQSTSDMSTPRDPRINGTPSVNRNGHGASFLVPYGQESSEESDQEGGSGLG
NGTAKPHVNGRKGETVYGPVPRVLTLKTNGIGNGQATMHRNGTNSFSKLSQNGHHNIKHP
EKIHGNGHAMSPGLGSSMSNGAEAHHSGPSKEVYCANPSQASTSQGLHSADIDSRLSLTP
EKRTKTHSGPLPHHAPSTAAKPPSSLADVGAKPLTDALRESSSNPGVLFLQPTPRSLSTP
VAPVLSGPGLGATKDLGAPHRGSGEDVRETQNSPAVGLDGKPSSRDGRDQMYSSDRDKEK
GGLNSSDRDKEKGGLNSSDRDKEKGGLNSSDRDKEKGRLHSSDCDRDRDRLYSSDRDKDG
EGDRYHRDRSRERNRDHDSDHYRHRRDHRDRDHHRSYRDRSLSRDRHRNWESEAFLSQRR
YHPRERDRDRCHHHYHHRTSKDRNRDRREHSHHSLPHREEPHGRSRWRDEGKERCYYPSQ
ETPLPTPLSSSTKPSQSLPALSPAIPALVKRPEPHREERKDSSEEHRAKKPKKSKKKKSK
DRERHRENRTFDVNSSDRAANGSSSSKHNKSRRYDTDTEDEKSGGEIQSTQSPEGHCDPN
APREGRRASSSDDERASKKRRCQDDGYDKSYPKIRHRADDNDRSFSSRDGSPTAAPQNAS
HCHFNEHTGNGLGQPNGNSHECSTNGLYNDLRQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagagaaatctgacctagagtcagtcgggtgcaagcgc
tcaggatcgctgaactttcccggtggtgacgggaacgggatggacagtggctgctccagc
tggggggcggggggcccctcgtcctccgacacccccagggtgaagacagggggctgcatg
ggtcccacccctggagccacagtcaacagcagcagtgcagacaggcccaaggagcaagtg
gtgctgaccagtggggacggcatcgccctgccccagaaggtgctgttcccagccgagcgg
ctcagcctgaagtggaaccaggtccaccgcatcggatcaggtctccagaacctgggaaac
acctgcttcctcaactctgctctgcagtgtctcacctataccgctcccctcactaactac
atgctgtcccgggagcactctaaaacatgtcatgagcctgggttctgtatgatgtgcaca
atgcagaatcacatcacccaggtcttcgccaactctgggaatgtcatcaagcccatcgga
gtcctcaacgagctcaaaaggattgcaaagcatttccgctttggcagccaagaggacgca
catgagttcctgcggtacacagtggacgctatgcaaaagtcctgcctgcctctaaacaaa
ttggacaggcaaacgcaagcaaccagtttcatccatcaggtctttggagggtatctacgg
tccagagtaaaatgtttcaactgcaaagcggtctctgacacgtttgacccttatttggat
gttgctttggaaataaagactgctcccagtatcacaaaggctctggaacagtttgttaag
cctgagcagctagatggagagaatgcctacagatgcgctaagtgtaagaagatggttcca
gcctctaagagattcaccatccaccgcagcgctaatgtgctcaccatctcactgaagcga
tttgccaactacaacgggggcaagatcgctaaggatgtaaggtatgctgagtgcctagac
ctgcgtcccttcatgtctcagtcccacggcgagccccaggtctacgtgctctatgctgtc
ctggtgcactctggcttcagctgccacgctggacactactactgctacgtcaaagctagc
aatggccagtggtaccagttgaatgactcctctgtgttggtcagtgacatcaggtcagtc
ctcaaccagcaggcttacgtcctcttctacatcaggtcacctgatctgaagaatggaggg
gactacaatcacacgtgccggaccccggggcccctcggccagttgtccccccgccccatc
ctcacaccccgggtcaacattgggccacgacacaccagcactggcttcatagggccacag
ctgcccccacacatggccaagaacatctttcaagtcaatgggaacggctcgctaagggac
tacccctctggctctaagcccagcaccagcagtgacaacagcatgggcaagactagctac
aacccgctcgccacctctccctcccatcctctcaaccgtcccacaggcatccctgaccct
gccaagcgccagaagctctccttcttcatcggtcagggcaaacagatccgcccctcatca
tccacttatgcccagccgtcctcttcgtcacagtctacatcagacatgtctacgccccgg
gatcctcgcattaacggcactccctccgttaacagaaacggtcacggggcgtcgttcctg
gtgccgtacggccaggagtcgtctgaggagtcggaccaggagggaggcagtggtctgggg
aacggcacggctaagcctcacgttaacgggaggaagggagagaccgtctacggccccgtc
cccagagtgctgaccctcaagaccaacggcatcggtaatggccaggctaccatgcaccgt
aacgggaccaacagcttctccaaactcagtcagaacggacaccacaacatcaaacaccct
gagaagatccacggtaacggtcatgcgatgtcacccggtttgggttccagcatgtctaat
ggggcggaggctcaccacagtggcccaagcaaagaagtgtattgcgccaaccccagccag
gccagcacctctcaaggcctgcacagtgccgacatcgacagccgcctctccctcacccca
gagaaaaggactaaaacgcactctggccccctccctcaccacgcaccatcaaccgctgct
aaacctccatcctcattggctgatgttggagctaaaccacttaccgacgccttgagggaa
tccagctccaaccctggggtcttattcctccagcccactccccgctccctcagtacccca
gtcgccccagtcctctccggaccaggcctgggagccacgaaagatctcggagccccacac
aggggatctggggaggacgtcagggagacccagaacagcccagctgtagggctggatgga
aagcccagctccagagatggaagagaccagatgtactcttccgatcgggataaggagaaa
ggcgggttgaactcttccgatcgggataaggagaaaggcgggttgaactcttccgatcgg
gataaggagaaaggcgggttgaactcttccgatcgggataaggagaaaggccgactacat
tcttcggactgcgatagggatcgagaccggctgtactcttctgaccgggataaagacgga
gaaggggataggtaccaccgggacaggagccgtgaacgcaaccgggaccatgactcagac
cactacaggcaccggcgagaccaccgagacagagaccaccaccggtcgtaccgggaccgc
tcgctcagccgggacagacaccggaactgggagtctgaggcattcctctcacagcgacgc
tatcaccccagagagagggacagggaccgctgtcaccaccattaccaccacagaacgagt
aaggacaggaatagggacaggagggagcacagccaccacagcctcccacacagagaggag
cctcatggacgctcaaggtggagggatgaaggtaaagagaggtgttactacccttcacag
gagacccctctacccaccccactgagctccagcaccaagcccagtcagtccctcccagcc
ctttccccagccataccagccctggtgaaacgacccgagcctcacagagaggagagaaag
gacagctctgaggagcatcgggccaagaaacccaagaagagcaagaagaagaagtccaag
gacagagagaggcaccgagagaataggacatttgacgtgaattcctctgacagggcagcc
aacggcagcagttcctccaaacacaacaaaagtaggaggtacgacactgacacggaggat
gagaagtcagggggtgagatccagtctacccagagtcccgaggggcactgtgaccccaat
gccccccgggagggtcgcagggcaagcagcagcgatgatgagagggcgagcaagaagcga
cgttgccaggacgatggctatgacaaaagctaccctaagatacgccatcgcgccgatgac
aacgaccgctccttctcctctcgtgatggatcaccaacagcagctcctcaaaacgcatcg
cactgccacttcaacgaacacacaggtaatggcttaggtcaacccaatggaaactcccac
gaatgttctaccaatggactgtacaatgaccttagacagtag
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integrated database retrieval system
