Oncorhynchus tshawytscha (Chinook salmon): 112259460
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Entry
112259460 CDS
T05605
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
otw01100
Metabolic pathways
Module
otw_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
112259460
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112259460
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
112259460
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
112259460
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112259460
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
FAM184
Glyco_transf_7N
Csm1_N
Motif
Other DBs
NCBI-GeneID:
112259460
NCBI-ProteinID:
XP_042182517
UniProt:
A0AAZ3RG89
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Position
LG09:complement(14356839..14437035)
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AA seq
568 aa
AA seq
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MLRRGLLAWVSRVGVLLVVVCCSLSLLYVMTCSPHTEDNLVSHALPRPGMGVGIGGAAGG
TGAAQSGPTGRNGYQAMLAEREEQHKFHITSLKKQIAQLKEALQERSQQLKGVQDSMERG
TGGGRGGQSPGGGILGEGGQGPGADRSHADLQEFLHSQLGRAEVHQGTRLPSEYAMVPFE
SFTLQRVYQLEMGLTRHPEEKPVRKDRRDELSEALETALQSLNTPRNGADKGHTTKVYSA
SDFIEGITRTEKDKGTVYELTFKGDQSREFRKLVLFRPFGPLMKVKNERVDTANVRINII
VPLSQRADKFRHFMHNFREVCVRQDGRIHLTVVYFGKDQMNEVRSTLENTSREINFKNFT
LLQLNEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTCRLNTQPGKKVFYPVL
FSQYNPTLIYGNHDYIPPVEQQLVIKKDTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGW
GGEDVHLYRKYLHSNLLVVRSPSRGLFHLWHEKRCADELPPEQYRMCMQSKAMNEASHGQ
LGMLFFRHEIEAHLHKQKPQRLNPAKKT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggaggggtctgctggcctgggtgtcccgtgtgggcgttctgctggtcgtagtg
tgctgctctctgtccctcctctacgtcatgacctgcagcccccacaccgaggacaacctg
gtgagccatgccctgccacgccccgggatgggggttgggataggaggggcagcggggggc
acgggggcggctcagagcggacccactgggcggaatggataccaagccatgcttgcagag
cgcgaggagcaacacaagttccacatcactagtttaaagaaacaaatcgcccagctgaag
gaggcgctacaggagcgcagccagcagctgaaaggagttcaagactccatggagcggggg
acagggggaggccggggtggccagtccccaggaggaggtatccttggggagggaggacaa
gggccaggggccgacaggagccacgctgaccttcaggagttcctccacagccagctgggc
cgggcggaggtccaccaggggactagactacccagtgagtacgccatggtgcccttcgag
agcttcaccctgcagagggtgtaccagctggagatgggcctgacaaggcaccctgaggag
aagcctgtgaggaaggaccggagggatgagctgagtgaagcgctagagacagccctgcag
agtctcaacacgccccgcaacggagcagacaagggccacaccaccaaggtctactcagca
tcagacttcatagaaggtatcactcggacggagaaggacaaaggcactgtgtatgagctc
accttcaaaggtgaccagagccgtgagttcaggaagctggttctgttccgtccctttggg
ccgctgatgaaggtgaagaacgagagggtggacacagccaacgtccgcatcaatatcata
gtgcccctctcccaacgagccgacaagttcagacactttatgcacaacttcagagaggtg
tgtgtgcggcaggacgggcgtatccacctaactgtggtgtactttgggaaggaccaaatg
aatgaagtcaggagcacgctggagaacacatctagggagatcaacttcaagaacttcact
ctgctccagctgaatgaggagttctcccgggggcgtggcctggatgtgggtgccagggcg
tggaaaggagggaacgttctccttttcttctgtgatgtcgacatctacttcaccgctgac
ttcctcaacacctgccgactcaacactcaacctggtaaaaaggtgttctatcctgttctg
ttcagccagtacaacccaaccctgatttacggtaaccacgactacatccctccagtggag
cagcaactggtcattaaaaaggatacaggattctggagagactttggcttcggaatgaca
tgccaataccgatcagatttcatcaacataggtggtttcgacgtggacatcaaaggctgg
ggcggcgaggacgtgcacctttacaggaaataccttcacagcaacctgctggtggtgcgg
tccccgtctaggggcctcttccacctgtggcacgagaagcgctgcgcggacgagctgccc
ccggaacagtacaggatgtgcatgcagtccaaggccatgaacgaggcctcgcacggccag
ctgggcatgctctttttccgacacgagatcgaggcacacctgcacaagcagaaaccccag
aggctaaaccctgccaagaagacatga
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