Oncorhynchus tshawytscha (Chinook salmon): 112259641
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Entry
112259641 CDS
T05605
Name
(RefSeq) integrin alpha-6-like
KO
K06485
integrin alpha 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04514
Cell adhesion molecules
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112259641
04514 Cell adhesion molecules
112259641
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112259641
09142 Cell motility
04820 Cytoskeleton in muscle cells
112259641
04810 Regulation of actin cytoskeleton
112259641
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112259641
04515 Cell adhesion molecules [BR:
otw04515
]
112259641
04090 CD molecules [BR:
otw04090
]
112259641
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112259641
Exosomal proteins of breast milk
112259641
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin alpha subunits
112259641
CD molecules [BR:
otw04090
]
Proteins
112259641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
FG-GAP_2
LYRIC
Motif
Other DBs
NCBI-GeneID:
112259641
NCBI-ProteinID:
XP_042184875
LinkDB
All DBs
Position
LG10:complement(69626012..69667361)
Genome browser
AA seq
1054 aa
AA seq
DB search
MGDRWIQFLSSLSLLFLLEWTQISSFNLDTENVLIKNGEPGSLFGFSLAMHRQLAPVDKI
MLLVGAPRAKALGGQKSKVTGGLYNCDTTSSSCNRVELDNDEDLKTESKENQWMGVTVNS
QGPGGKIVTCAHRYQLRLFVNTPQESRDITGRCYMLNQDLTIEEDGGNWRFCEGRARGHE
RFGSCQQGLSATFTRDYEYLVFGAPGAYDWKGMVRIEHKNNTLLEMRSYKDGPYEVGDEN
QLNPDLVPVPPNSYLGFSLDSGKAITKKGQLTVVAGAPRAHHSGEVVLLKKESDESSMLS
PEYILEGEGLASSFGYDLTVVDLTGDGWQDIVVGAPQFFEKDGKVGGAIYAYINKGGVWS
KLTPTRIDGPQDSMFGLAVENLGDLNLDGYQDIAVGAPYDDSGSGKVFIYHGSAQGINIK
PAQVLSGVPSKTRLFGYSLAGNMDLDRNSYPDLAVGSLSDSVFVYRARPVINIQKVVKTM
PKEIDLTKKNCGNNICLEVEACFSYTANPKSYNPKLTVAYSFEADAERRKKGLPPRVTFS
TRSSEDHDYESTGVLTLSAQGKKECITAKLTLQENIKDKLRGIPIEVAVEIQNSKRKRRA
LPGLTPILDSNQPITAIAEVSFLKEGCGSDNLCQSNLQLQHRFCYREPNKDIFHLLPMEN
GVPVVSLSDQKDIALEITVTNKNGDDAHEAALVASFPSSLSYSASYSAPKADRQVSCVAN
KNGSQADCELGNPFKRDSEVTFYIILSTAGISLNTTELEIDLKLETTSDQQKVGRVKAKA
KVVIELQLSLTGVAKPSQVYFTGEVKGESDMKSEGDIGSPIEYEFRVINLGKPLKTYGTA
SLIINWPKETVEGKWILYLVKMDSQGLEQITCSPEREINPLPVKEESRSSRRRRAVGETD
KPEGTIALLTDKRKYTTLSCEDGAKCVEIHCSLQGLDSNAVILLRSRLWNSTFLEEYSKL
NYLDVIVKASLRVDGTAKNMVLRNAETQVRVTVFPERRVAQYGGLPWWIILVAILLGLLL
LGLLVFLLWKCGFFGKKKEDAPPSDKERLTPSDA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggggatagatggatacaattcctctcatctctatcgcttctctttctcctggaatgg
acgcaaatatcatctttcaacctggacacagaaaacgtcctgataaagaatggagagccc
gggagtcttttcggcttctctctcgccatgcaccgacagttagctccagtggataagatc
atgttgcttgttggtgctccgagggccaaagctctgggaggtcagaagtcaaaggtcaca
ggaggactctacaactgtgacaccacttcctccagctgtaaccgtgtggagcttgacaac
gatgaggacctgaaaactgagagcaaggagaaccagtggatgggtgtaacagtgaacagc
cagggaccaggaggaaagattgtgacgtgtgcccaccgctaccagctgcgtctgtttgtg
aacacgccccaggagtctcgtgacatcacaggaaggtgttacatgctgaaccaggacctg
acaatcgaggaggatggagggaactggaggttctgtgaggggcgggcacgcggacatgag
aggtttggctcatgccaacagggtctgtctgccaccttcactagggactatgaataccta
gtgtttggagctcctggagcatatgactggaaaggtatggtgagaatagagcataagaac
aacactctgttggagatgcgttcgtataaagacgggccctatgaggtgggcgatgagaac
cagttaaacccagacctggtccctgtgccccctaacagctacctgggcttttctttggac
tcagggaaggccatcactaagaagggtcagctgacagtggttgcaggcgctccgagagcc
catcacagcggagaggtggtgttgctaaagaaggagtccgatgagtcctccatgctgtca
ccagagtacatcctggaaggggaggggttagcctcatcgtttggctacgacctcactgtg
gtggatctcactggagacgggtggcaggatatcgtggtgggagcccctcagttctttgag
aaggatggaaaggtgggcggagctatttatgcctacattaacaagggcggagtctggagt
aagctcacacccaccaggatagacggacctcaggactccatgttcggactggctgtagaa
aacctgggagatctcaacctggacggttatcaggacattgctgtgggagcaccatatgat
gacagtgggtcagggaaggtgttcatctaccacggctcagctcagggcatcaacatcaaa
ccggcacaggtgttgtcaggggtgccatcgaagacgaggttgttcggttattctctagct
ggtaacatggacctggacaggaactcctaccctgacctggccgtagggtccctctccgac
tccgtgtttgtctaccgagctcggccagtcatcaatatccagaaggttgtgaagacaatg
ccaaaggagattgatctaactaagaagaactgtggcaacaacatttgcttggaggtagag
gcctgtttctcctacacagccaaccccaaatcctacaaccccaaactgacggtggcatat
tcctttgaagcggatgcggagcgtaggaagaagggtcttccccccagagtgaccttctcc
acacgttccagtgaggaccatgactacgagtccactggtgttctcaccctcagtgcacag
ggcaagaaggagtgtatcactgccaaactcactctacaggagaacattaaggacaagctt
aggggaatccccattgaggttgctgtggagatacagaactccaaaaggaagagaagagcg
ctcccagggctcacgcccatcctcgactccaaccagcctatcacagccattgctgaggtg
agtttcctgaaggaaggatgtggcagtgataatttgtgtcagagtaatttacagcttcag
caccgcttctgctacagagaacccaacaaggacatcttccatctactacctatggagaat
ggggtgccagtggtctcccttagcgaccagaaggacatcgccctagagatcacagtgacc
aataagaatggagatgatgctcatgaggcagcattggttgcctccttcccctcctctctc
tcctactccgcctcctactctgcacccaaggcagacaggcaagtgtcctgtgtggcaaat
aagaatggctctcaggcagactgtgagctggggaaccccttcaagcgagactcagaggta
acgttctacataatcctgagtacagcaggcatctctctgaacaccacagagttggagata
gacctgaagctggagacgacaagtgaccagcagaaggtgggcagagtcaaggccaaggcc
aaagtggtgatcgagctgcagctgtccctcacaggagtggccaagccctcccaggtctac
ttcactggagaggtcaaaggtgagagcgacatgaagtcagagggagacatcggcagcccg
atcgagtatgagttcagggtgatcaacctagggaagcccctgaagacctatggcaccgcc
tccctgatcatcaattggccgaaagaaactgtggaggggaagtggatcctgtacctggtg
aagatggactcccaaggtctggaacagatcacatgctctccagagagagagatcaaccca
ctccctgtcaaagaggagagtaggagtagcaggaggaggcgagctgtaggggagactgac
aaacctgagggaaccatcgcactgctgactgacaaaaggaaatacactactctgtcgtgt
gaggatggggcaaagtgtgtggagattcactgctccctacagggcctggacagtaatgca
gtcatcctgctcagatctcgcctctggaacagcacattcttggaggagtactctaagctg
aactatctggacgtgatagtgaaagcctctctcagagtggacggcacagctaaaaacatg
gtcctgaggaacgctgagacacaggtgagagtgacggtgttcccggagcgtcgtgtggct
cagtacggaggactgccatggtggatcatcctggtggccatcttgttaggacttttgctg
ctcggcctgctggtcttcctgctctggaagtgtggtttcttcgggaagaagaaagaggat
gccccaccctctgacaaagagagattgacgccgtctgacgcataa
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