KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112259641
Entry
112259641         CDS       T05605                                 
Name
(RefSeq) integrin alpha-6-like
  KO
K06485  integrin alpha 6
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510  Focal adhesion
otw04512  ECM-receptor interaction
otw04514  Cell adhesion molecules
otw04810  Regulation of actin cytoskeleton
otw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112259641
   04514 Cell adhesion molecules
    112259641
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112259641
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112259641
   04810 Regulation of actin cytoskeleton
    112259641
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112259641
   04515 Cell adhesion molecules [BR:otw04515]
    112259641
   04090 CD molecules [BR:otw04090]
    112259641
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112259641
  Exosomal proteins of breast milk
   112259641
Cell adhesion molecules [BR:otw04515]
 Integrins
  Integrin alpha subunits
   112259641
CD molecules [BR:otw04090]
 Proteins
  112259641
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 FG-GAP_2 LYRIC
Other DBs
NCBI-GeneID: 112259641
NCBI-ProteinID: XP_042184875
LinkDB
Position
LG10:complement(69626012..69667361)
AA seq 1054 aa
MGDRWIQFLSSLSLLFLLEWTQISSFNLDTENVLIKNGEPGSLFGFSLAMHRQLAPVDKI
MLLVGAPRAKALGGQKSKVTGGLYNCDTTSSSCNRVELDNDEDLKTESKENQWMGVTVNS
QGPGGKIVTCAHRYQLRLFVNTPQESRDITGRCYMLNQDLTIEEDGGNWRFCEGRARGHE
RFGSCQQGLSATFTRDYEYLVFGAPGAYDWKGMVRIEHKNNTLLEMRSYKDGPYEVGDEN
QLNPDLVPVPPNSYLGFSLDSGKAITKKGQLTVVAGAPRAHHSGEVVLLKKESDESSMLS
PEYILEGEGLASSFGYDLTVVDLTGDGWQDIVVGAPQFFEKDGKVGGAIYAYINKGGVWS
KLTPTRIDGPQDSMFGLAVENLGDLNLDGYQDIAVGAPYDDSGSGKVFIYHGSAQGINIK
PAQVLSGVPSKTRLFGYSLAGNMDLDRNSYPDLAVGSLSDSVFVYRARPVINIQKVVKTM
PKEIDLTKKNCGNNICLEVEACFSYTANPKSYNPKLTVAYSFEADAERRKKGLPPRVTFS
TRSSEDHDYESTGVLTLSAQGKKECITAKLTLQENIKDKLRGIPIEVAVEIQNSKRKRRA
LPGLTPILDSNQPITAIAEVSFLKEGCGSDNLCQSNLQLQHRFCYREPNKDIFHLLPMEN
GVPVVSLSDQKDIALEITVTNKNGDDAHEAALVASFPSSLSYSASYSAPKADRQVSCVAN
KNGSQADCELGNPFKRDSEVTFYIILSTAGISLNTTELEIDLKLETTSDQQKVGRVKAKA
KVVIELQLSLTGVAKPSQVYFTGEVKGESDMKSEGDIGSPIEYEFRVINLGKPLKTYGTA
SLIINWPKETVEGKWILYLVKMDSQGLEQITCSPEREINPLPVKEESRSSRRRRAVGETD
KPEGTIALLTDKRKYTTLSCEDGAKCVEIHCSLQGLDSNAVILLRSRLWNSTFLEEYSKL
NYLDVIVKASLRVDGTAKNMVLRNAETQVRVTVFPERRVAQYGGLPWWIILVAILLGLLL
LGLLVFLLWKCGFFGKKKEDAPPSDKERLTPSDA
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgggggatagatggatacaattcctctcatctctatcgcttctctttctcctggaatgg
acgcaaatatcatctttcaacctggacacagaaaacgtcctgataaagaatggagagccc
gggagtcttttcggcttctctctcgccatgcaccgacagttagctccagtggataagatc
atgttgcttgttggtgctccgagggccaaagctctgggaggtcagaagtcaaaggtcaca
ggaggactctacaactgtgacaccacttcctccagctgtaaccgtgtggagcttgacaac
gatgaggacctgaaaactgagagcaaggagaaccagtggatgggtgtaacagtgaacagc
cagggaccaggaggaaagattgtgacgtgtgcccaccgctaccagctgcgtctgtttgtg
aacacgccccaggagtctcgtgacatcacaggaaggtgttacatgctgaaccaggacctg
acaatcgaggaggatggagggaactggaggttctgtgaggggcgggcacgcggacatgag
aggtttggctcatgccaacagggtctgtctgccaccttcactagggactatgaataccta
gtgtttggagctcctggagcatatgactggaaaggtatggtgagaatagagcataagaac
aacactctgttggagatgcgttcgtataaagacgggccctatgaggtgggcgatgagaac
cagttaaacccagacctggtccctgtgccccctaacagctacctgggcttttctttggac
tcagggaaggccatcactaagaagggtcagctgacagtggttgcaggcgctccgagagcc
catcacagcggagaggtggtgttgctaaagaaggagtccgatgagtcctccatgctgtca
ccagagtacatcctggaaggggaggggttagcctcatcgtttggctacgacctcactgtg
gtggatctcactggagacgggtggcaggatatcgtggtgggagcccctcagttctttgag
aaggatggaaaggtgggcggagctatttatgcctacattaacaagggcggagtctggagt
aagctcacacccaccaggatagacggacctcaggactccatgttcggactggctgtagaa
aacctgggagatctcaacctggacggttatcaggacattgctgtgggagcaccatatgat
gacagtgggtcagggaaggtgttcatctaccacggctcagctcagggcatcaacatcaaa
ccggcacaggtgttgtcaggggtgccatcgaagacgaggttgttcggttattctctagct
ggtaacatggacctggacaggaactcctaccctgacctggccgtagggtccctctccgac
tccgtgtttgtctaccgagctcggccagtcatcaatatccagaaggttgtgaagacaatg
ccaaaggagattgatctaactaagaagaactgtggcaacaacatttgcttggaggtagag
gcctgtttctcctacacagccaaccccaaatcctacaaccccaaactgacggtggcatat
tcctttgaagcggatgcggagcgtaggaagaagggtcttccccccagagtgaccttctcc
acacgttccagtgaggaccatgactacgagtccactggtgttctcaccctcagtgcacag
ggcaagaaggagtgtatcactgccaaactcactctacaggagaacattaaggacaagctt
aggggaatccccattgaggttgctgtggagatacagaactccaaaaggaagagaagagcg
ctcccagggctcacgcccatcctcgactccaaccagcctatcacagccattgctgaggtg
agtttcctgaaggaaggatgtggcagtgataatttgtgtcagagtaatttacagcttcag
caccgcttctgctacagagaacccaacaaggacatcttccatctactacctatggagaat
ggggtgccagtggtctcccttagcgaccagaaggacatcgccctagagatcacagtgacc
aataagaatggagatgatgctcatgaggcagcattggttgcctccttcccctcctctctc
tcctactccgcctcctactctgcacccaaggcagacaggcaagtgtcctgtgtggcaaat
aagaatggctctcaggcagactgtgagctggggaaccccttcaagcgagactcagaggta
acgttctacataatcctgagtacagcaggcatctctctgaacaccacagagttggagata
gacctgaagctggagacgacaagtgaccagcagaaggtgggcagagtcaaggccaaggcc
aaagtggtgatcgagctgcagctgtccctcacaggagtggccaagccctcccaggtctac
ttcactggagaggtcaaaggtgagagcgacatgaagtcagagggagacatcggcagcccg
atcgagtatgagttcagggtgatcaacctagggaagcccctgaagacctatggcaccgcc
tccctgatcatcaattggccgaaagaaactgtggaggggaagtggatcctgtacctggtg
aagatggactcccaaggtctggaacagatcacatgctctccagagagagagatcaaccca
ctccctgtcaaagaggagagtaggagtagcaggaggaggcgagctgtaggggagactgac
aaacctgagggaaccatcgcactgctgactgacaaaaggaaatacactactctgtcgtgt
gaggatggggcaaagtgtgtggagattcactgctccctacagggcctggacagtaatgca
gtcatcctgctcagatctcgcctctggaacagcacattcttggaggagtactctaagctg
aactatctggacgtgatagtgaaagcctctctcagagtggacggcacagctaaaaacatg
gtcctgaggaacgctgagacacaggtgagagtgacggtgttcccggagcgtcgtgtggct
cagtacggaggactgccatggtggatcatcctggtggccatcttgttaggacttttgctg
ctcggcctgctggtcttcctgctctggaagtgtggtttcttcgggaagaagaaagaggat
gccccaccctctgacaaagagagattgacgccgtctgacgcataa

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