Oncorhynchus tshawytscha (Chinook salmon): 112259654
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Entry
112259654 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 12 isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259654
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112259654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3-WW_linker
RhoGAP
WW
PH
SH3_1
SH3_10
Motif
Other DBs
NCBI-GeneID:
112259654
NCBI-ProteinID:
XP_042184973
LinkDB
All DBs
Position
LG10:73921540..74081301
Genome browser
AA seq
905 aa
AA seq
DB search
MAAERDGRGCELPIAPGQVYIEVEYDYNYKSKERQVSIHQGECYMLVKKTNGDWWQVKKE
EGAKAFYVPAQYVREVRKALMPPPKPLHLGHHRGGSGGNPVRIKPIVLEMDRSNESLNVT
SFSRPSPSSPSPSSSSGAALTPPRQRRDRDANQNPGRDPGSPTDYDRALVDVLQNTHAPG
RGCNTLPRARATSPELRRAPLDVDMPPGHCDSEGSERRNDSESGDELSSGSSEHLQTVSL
PGQGGRPESPVYTNLQELKISGTSLPPDPSNFPQHVLGDWEAHKDQSGRPFYFNRSTQER
TWKPPRARDASSGSSRGESHSNSTGETETTPPLSLSPSFLPLLSLSISPFQPLLLEDNCH
STYSSQSDSQYGYPPRGWSEELDEHGHTLYVSDYTNEKWIKHVDEQGRPYYYSADGSRSE
WELPKYQHSPPLPGGGDRTPKSHSLDRKHVEPIVLTKWANSSNVLDANDKRLTKNIRRFR
TGSGGPHPYRQTQDGALGPMVPGSPDSASSGPSSPKSPTSPSEKCGILNVTKITEHGKKV
RKNWTSSWTVLQGSSLIFAKGQGGGTSWFGGNQSKPEFTVDLRGGSIEWASKDKSSKKHV
IEVKTHQSTELLIQSENDGVINDWYRALMDTISTHAWESDEALEEDMPESPGAEKQDKEK
EHRDSKKSRAMKSSTSMDASDNKKTRIKLKKFLTRRPTLQTVRDKGYIKDQVFGCSLSDL
CHRENTAVPSFVTMCIDHVENNALNVDGLYRVSGNLAVIQKLRFAVNHDEKVNLEEGKWE
DIHVITGALKMFFRELPEPLFTYGLFHDFVNSIKIPDNKQRVQSIKERVKQLPKPNQDTM
QVLFKHLRRVIDHSEENRMTTQSVAIVFGPTLLRPETETWNMAVHMVYQNQIVELILLEY
EGIFR
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagcgtgatgggcgagggtgtgagctgcccatcgccccgggccaggtgtac
atcgaggtggagtatgactacaattacaagtccaaggagcgtcaggtctccatccaccag
ggagagtgttacatgttggtgaaaaagaccaacggggactggtggcaggtcaagaaggag
gagggggccaaggcgttctatgtcccagcgcagtacgtcagggaggtccgcaaggccctc
atgccacctcccaagcccctgcacctggggcatcaccgtggggggagcgggggaaaccct
gtgcggatcaaacccatcgtcctggagatggacagatctaacgagagcctgaatgtgacc
agtttcagtcggccctctccctcctcaccttctccctcctcctcgtcgggggcagccctc
acccctccgaggcagcgcagggacagggatgccaaccagaaccctggtagagaccctggt
agccccactgactacgacagggccttggtagatgtcctccaaaacactcacgctcctgga
cggggatgtaacacgctgccccgtgcccgtgcaacctcccctgagctccgcagggcgccc
ctggatgtggacatgcctccagggcactgtgactcggaggggtcggagagacgcaacgac
tcagagtctggagatgagctgagcagcggttctagtgaacacttgcagactgtctctctg
ccgggtcagggtggtcgtcctgagtctcctgtctacactaacctgcaggagctgaagatc
tctgggaccagcctgccccccgacccctccaacttcccacagcatgtcctgggggactgg
gaggcccacaaggaccagagcggcagaccgttctacttcaaccgttccacccaggagagg
acatggaaacctccccgagccagagacgccagtagtggcagcagccggggggaatcccac
agcaatagcactggggagacggagacgactccgccgctctctctctccccgtccttcctt
cctctcctctcgctgtccattagtccgttccagcctctgttgttggaggacaactgccac
agcacgtattctagccaatcagacagccagtacggctacccgccccggggttggtcagaa
gagctggatgagcatggacacactctgtatgtcagtgattatactaatgagaagtggata
aagcacgtggatgaacagggtagaccatactactacagtgctgatggctccaggtcagag
tgggagctgcccaagtaccaacactccccccctctacctggtggaggagaccggacccct
aagagccacagtctggataggaaacatgtggagcccatcgtcctgaccaagtgggcaaac
agcagcaacgtgctggacgccaacgacaagcggctcaccaaaaacatcaggcgtttccgt
acaggctctggtggcccccacccctacagacagacacaagacggtgcgttgggccccatg
gtccctggctctccagactctgcctcctcaggcccctcgtcccccaagtcccctacctcc
ccttcagagaagtgtggtattctcaacgtgaccaagatcactgagcatggaaagaaagta
cggaagaactggacgtcatcctggacggttctccagggctcctcgctgatatttgctaaa
ggccaggggggcgggaccagctggtttggagggaaccagtctaaaccagagttcactgtt
gacctgagaggaggatctatagaatgggcttccaaggacaagtccagcaagaagcatgtc
attgaggtaaaaacccatcagagtacagagctgctgatccagtcagagaacgacggcgtc
atcaatgactggtacagggcactgatggacaccatcagcacacacgcctgggagtcagat
gaggccctagaggaggacatgccagagtctcctggagcagagaaacaagacaaggagaaa
gagcacagagactctaagaagagccgagccatgaagagttccaccagtatggacgcgtcg
gacaacaagaagaccagaatcaagctgaagaagttcctgacacgtagacccactctgcag
acagtcagagacaagggctacatcaaagaccaggtgtttggctgcagtctgagtgacctc
tgtcatagagagaacacggccgtgccaagcttcgttacgatgtgcatcgaccacgtggaa
aacaacgctctgaatgtggatgggctgtacagagtgagtgggaacctggctgtcatccag
aaactacgcttcgctgtcaatcatgatgagaaggtgaacctggaggaagggaagtgggag
gacatccatgtgattacaggagcgttgaagatgttcttcagagagctgcctgaacccctc
ttcacatatggattattccatgactttgtcaactccatcaagatcccagacaacaagcag
cgtgtccagtccatcaaggagcgggtcaaacagttgccaaaacccaatcaggacactatg
caggtcctcttcaaacacctcaggagggtgattgaccacagcgaggagaaccgtatgacg
acccagagcgtggccatagtgttcggccccaccctcctcagacccgagacagagacgtgg
aacatggcggtccacatggtctatcagaaccagatagtagagctcatcctgctggagtac
gagggcatctttaggtag
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