Oncorhynchus tshawytscha (Chinook salmon): 112259655
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Entry
112259655 CDS
T05605
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112259655
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
112259655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Homeodomain
zf-C2H2_15
zf-Di19
zf-C2H2_jaz
zf-met
Motif
Other DBs
NCBI-GeneID:
112259655
NCBI-ProteinID:
XP_042185530
LinkDB
All DBs
Position
LG10:complement(74102787..74118686)
Genome browser
AA seq
968 aa
AA seq
DB search
MIQQGDTAVIYPKAPGGKQKSASEREVSEKTGTPDTLSQLLTCPYCSRGYKRCTALKDHI
KLRHEKSEDNFSCSQCSYTFTYRTQLDCHMTQHKNQHKAPVQRHVPQTTTTTITTGGNRK
FKCTECSKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCVGMVPVN
GNPSPVIKVSNQTPSQTQPSGPPAAPVRVLLRGEKTDSKPLQEQLPHTQIKSEPVDYEFK
PVVVAPNGAVGTNGTVFNGGVALPQGTALPQGMVQAVVLPTMGLMSPITINLSDLQNMLK
VALDGNVLRQVLGTANGLVTSKQGFVTQAGQQVISAISLPGFVDQDGTTKIIINYSLEPS
PAQQPTAPQLLKQEAPPPTNNTNTASATNTQPASKVTEKLPQDLHINKTEPDDSEHESEM
ETQETETEAETPKAQTGKTRCLLCDNCPGDLDALHMLQHCKPANGDGGDSATFDPSIAAL
LAEAGITPGQHPLKNLLSLLKAYFALNAEPTEEELAKISDNVSLPVDVVKKWFEKMRSGQ
ITVGPPGSSPDDSGLSDSSTETQLDQEKSGTETEEQHASAQTQETSSSQTPASTSPSVSA
SAPSPLNLSSSGLVIVKTEVDSEREAQDLPLDLSLPKQPQSQPQVPHVPQEQPLNLTCLK
DTVQAQLPGLQGTTNTIYVTSSPQTTIPSPVNIMTTRLVAITNQGSGVPCLRAISTGTTK
RTILIPQLTYTYTTTACSGTTGADGAQKTVRINGCQEEKSATSSEGVSTVEEQDNSDSSP
PLKKMRRLQSGMYSCDLCDKIFQKSSSLLRHKYEHTGKRPHECGICDKAFKHKHHLIEHT
RLHSGEKPYRCDKCGKCFSHSGSYSQHMNHRYSYCKKESQGGRQGGPQLGMSPERSPQTE
EQQSDSRPTSPPSQLDSDERESEEELEEEEGMAAMSMDDIRVVQVGEDDEESEIYEVEEF
GKERKRKG
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcagggagacacggcggtcatctaccccaaggcgccgggcggcaaacagaag
agcgcgtctgagagagaggtctcagagaagaccggcacgccagacaccctctcccagctc
ctgacttgtccctactgctcacggggctacaagcgttgcacggccctgaaggaccacatc
aagctacgtcacgagaagagcgaagacaacttcagctgctcccagtgcagctacaccttc
acctaccggacacaactggactgtcatatgacccaacacaagaaccaacacaaggctcct
gtacagcgtcatgtaccccagaccaccaccacaacaataacaacaggggggaacaggaag
ttcaagtgtactgagtgttccaaggcttttaaatataagcaccacctgaaggagcatctt
cgcatccacagcggagagaagccatacgagtgccccaactgtaagaagaggttttcccac
tcagggtcctacagttcccacatcagcagtaagaagtgtgttggcatggtgcctgtcaat
ggcaaccccagcccagtcattaaggtctccaaccagacccccagccagacccagccctct
ggcccccccgcagccccagtccgagtgctcctccggggggagaagacagacagcaagccc
ctgcaggagcagctcccccacactcagattaaatctgagcctgtggattatgagttcaag
ccggtggtggtggcgcctaacggggcggtggggacgaatgggacggtgtttaacggtggc
gtggcgctaccccagggcacggcgctgcctcagggcatggtccaggcggtggtactgccc
accatgggtctgatgtctcctatcactattaacctcagcgacctgcagaacatgctcaag
gtggccttggatggaaacgtgctgcgtcaggtgttggggactgccaacgggctggtgacc
tccaagcaggggtttgtgacacaggctggccagcaggtaatctcagccatcagcctgcct
ggcttcgtggaccaggacggtaccaccaagatcatcattaactacagcctggagccaagc
ccagcccagcagcccaccgcccctcagctcctcaagcaggaggctccccctcccaccaac
aacaccaacaccgccagcgccacaaacacacagcccgcctccaaagtaacagagaaactc
ccccaggacctccacatcaacaagaccgagccggacgactcggagcacgagtcagagatg
gagacgcaggagacagagactgaagctgagacaccaaaggcccagacaggcaagacaagg
tgtctactgtgtgacaactgtcctggtgatttggatgcactgcacatgctccagcattgt
aaacctgccaacggggatggaggtgacagcgccaccttcgacccctccatcgccgccctc
ctggccgaggcagggataacaccaggccagcatcctctaaagaatctgctctcactcctc
aaggcctacttcgccttaaacgccgagcccaccgaggaagagctggccaagatctctgac
aatgtcagcctgcctgtggacgtggtcaagaagtggtttgagaaaatgcggtcaggtcag
atcacggtcggaccccctggttcctctccagatgactctggactttcagattccagcaca
gagacccagctagaccaagagaagagcgggacagagacagaggagcagcatgcctcggcc
caaacacaggagacatcatcttcccaaactcctgcctcgacgtccccctctgtctcagcc
tcggccccctcaccactaaacctctcctccagcggcctggtcatcgtgaagactgaggtc
gactctgagcgcgaggctcaagatcttcccctggacctgtcccttcccaagcagccccag
tcacagccccaggtcccccacgttccacaggagcagcccctcaacctcacctgcctgaag
gacacagtccaggcccagctcccaggactccagggaaccaccaacaccatctacgtcacc
tcctccccccaaacgactatccccagcccggtgaacataatgaccacccggctagtagcc
atcaccaaccagggcagcggtgtgccctgcctcagggccatctccaccggcaccaccaaa
cggaccatcctcatcccccagctcacctacacatacaccactacagcatgcagtggcacc
actggggccgacggagcccagaagaccgtcagaatcaatggctgccaggaggagaagtct
gccaccagctcagagggtgtgtcgacggtagaggagcaggataactcagactcttcccct
ccactgaagaagatgcgtcggctgcagagcgggatgtactcctgtgacctgtgtgacaag
atcttccagaagagcagctccctgctcaggcataaatacgaacacacaggaaagcggcca
catgagtgcggcatctgcgacaaagccttcaaacacaagcaccacttgatagaacacacg
cgactgcactccggagagaagccctatcgctgtgacaagtgtggcaagtgtttctcccac
tctggctcctacagccagcacatgaaccaccgatactcctactgcaagaaggagtcccag
ggagggcggcaggggggacctcagctcgggatgagccccgaaaggagtcctcaaacagaa
gagcagcagtcagacagccgacccacctccccaccttcccaactggactcagacgagagg
gagagtgaggaggagctggaggaagaggagggcatggcggccatgagcatggacgacata
cgggtggtgcaagtgggtgaggatgacgaggagagtgagatctacgaggtggaggagttt
gggaaggagaggaagaggaagggatga
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integrated database retrieval system
