Oncorhynchus tshawytscha (Chinook salmon): 112259735
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Entry
112259735 CDS
T05605
Name
(RefSeq) dynactin subunit 1-like isoform X4
KO
K04648
dynactin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112259735
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112259735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259735
03036 Chromosome and associated proteins [BR:
otw03036
]
112259735
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112259735
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112259735
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
112259735
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
112259735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
ATG16
Motif
Other DBs
NCBI-GeneID:
112259735
NCBI-ProteinID:
XP_024290126
LinkDB
All DBs
Position
LG10:14305320..14342028
Genome browser
AA seq
1256 aa
AA seq
DB search
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFQCDENCGIFVRQSQIQLVEDGATSPDIPESSTAKFLSKQKDVPEIPKSVKQWNTPGRL
SSSSSLPSLLMAPRAIGLSSSRSREDVSEGSLSSKGALGAPVVPLSSGNPATSGAPPPAT
PSKAEPPASMQEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKHKIQLEQLQEWKTK
MQEQQTDLQKQLKEAKKDAREALEAKDRYMEEMSDTADAIEMATLDKEMAEERSESMQVE
VESLKEKVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKDALVRMRDLSSSE
KQEHVKLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVETLT
ERNLDLEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQKRVE
AAQETVADYQQTINKYRQLTASLQDANKELTSAQNANAEQVQPPPPAELFDFKIKFAETK
AYAKAIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAELIS
KQAQEKFDLNGNPVERTGVKMRGPPGEQLSFASGLVYSLTLLQATLHKYQQALNCCSVQV
YTQMGTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLAEQTED
CTVQLADHIKFIQSALDCIGAEVVRLRAFLQPGQEGLALNILLKDLDTTCSDIKQFCKKI
RRRMPGTDVPGVPASLSFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQEGL
NALKLDDVAFKAVEQVYGSQGLNPHECLRQSCSAVISTMNKMATAMQEGEYDAERPQGKA
PPVEARAAALRAEITDAEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKKLD
TSTKDADERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSSQS
KSTIEGLRAPPASGIASIVTGSAGAALAPGAGGLSGPMQVVDSPLLRQQVEAQRLGIKHL
KNENNRLKAEKMRAQLASLPPLHVPKLHLREATSSSSPPAEGPLHGALYRKTEQLLGTLL
KMTATVKVVDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVAEHVVSQQPGAKVSSD
FATFPISSFVKAKEEKQGGTVFVGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLIA
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggacgggggaggcaagcctgccaaggtgggctcggtggtggaggtgatcggt
aagggccagcgtggcacggtggcgtatgtgggcgccacgctctttgccacgggtaagtgg
gtgggtgtgatcctggatgaacccaagggcaagaatgatggcacggtccaggggaagaga
tacttccagtgtgatgagaactgcggcatctttgtgcgccagtcccagatccagctagtg
gaagatggtgccacctctccagacatcccagaatcttccactgccaagttcctgtccaag
cagaaagacgtccctgagattccaaaatcagtcaaacagtggaacactccaggtcgtctc
tcctcctccagctccctcccctccctcctcatggctccccgagccatcggcttgtccagc
tctcggtccagggaggatgtcagcgagggcagcctgtcttccaagggtgcgctgggggct
cctgtcgtccccctgtccagcggaaaccccgccacgtccggagctccaccccccgccacc
cctagcaaggctgagcctcctgcatcaatgcaggaggaagagtctctgcgtggccaggtg
aaggacctagaggagaagctggagaccctgaagatgaagcgggcggaggacaaggtaaag
ctgaaggagctggagaaacacaagatacagctggagcagctccaggagtggaagaccaag
atgcaggagcagcagacggacctgcagaaacaactcaaagaggccaagaaggatgcccgg
gaggcattggaggccaaggaccgctatatggaggagatgtcagacacggcggacgccatc
gagatggccaccctggacaaggagatggccgaggagcggtccgaaagcatgcaggtggag
gtggagtcgctgaaggagaaggtggaggaactcaccatggacctggagataattaaacac
gaggttgaggagaaaggttctgacggagctgcctctagttaccacgtaaagcagttggag
gagcagaacagcaggctgaaagatgctctggtcaggatgcgtgacctgtcgtcgtctgag
aagcaggagcacgtgaagctgcagaagcagatggagaagaagaatggagagctggagact
ctgaggacacagaaggagaaactacaggaggagatgaagcaggctgaggccaccatcgat
gagttgaaggagcaggtggatgctgctctcggggcagaggagatggtagagactctaact
gagaggaatctggacctagaggagaaagtcagagagctgagagagacagtcactgacctg
gaagcgatcaacgagatgaatgacgagcttcaggagaacagccgagagacagagatggag
ctgagggagcagttggacctgaacggggccagggtgagagaggcccagaagagagtggag
gctgctcaggagactgtagcagactaccagcagaccatcaacaagtaccgccagctcact
gccagcctgcaggatgccaacaaggaactgaccagtgctcagaatgccaacgcagagcag
gtccagcctcctccaccagctgagctgtttgacttcaagatcaagttcgctgagaccaag
gcctacgccaaggccatcgagatggagctgaggaagatggaggtgggccaggccaacaga
caggtgtctctcctcacatccttcatgcccgattccttcctgcgtcacggaggagaccat
gactgtatcctggtgctgctgctcataccaagactcatctgcaaggctgagttgatcagt
aagcaggcccaggagaagtttgatctgaacggtaaccccgtggagaggactggggtgaag
atgagaggaccacctggagagcagctcagcttcgcctcaggactggtctactctctcacc
ctgctgcaggccacgctgcacaaataccaacaagctctgaactgctgcagtgtgcaggtg
tatacgcagatggggactctctactcagagatgagtgtccatgagcgttccctcgacttc
ttcattgacctgctgcacaaagaccagctggatgagactgtacacgtggagcctctcacc
aaggccatcaagtactaccagcaactgtacagcatccacctagctgagcagactgaagac
tgcaccgtgcagctggctgatcacatcaagttcatccagagtgcgttggactgtatcggt
gctgaggtggtgcgtctcagggctttcctgcagccgggacaggaggggctggctctgaac
atccttctgaaggacctggacaccacgtgcagtgacatcaaacagttctgtaagaagatc
agacgcaggatgccagggaccgatgtaccaggggtgccagcctctctgtcttttggagct
ccagtgtcggagacgctgacggactgcaggcgtcagctgacgcgggtggttgccgtgcta
caggaggtggctgcggcgggggcacagatggtcgctcctctcggggagcaggaggggcta
aacgctctaaaactggatgatgtggccttcaaggctgttgaacaggtgtatgggtcccaa
ggtctaaacccccatgagtgtctgcgtcagtcctgcagcgctgtcatctccaccatgaac
aagatggccactgccatgcaggagggagagtatgatgctgagagaccacagggaaaggct
cccccagtagaggctcgtgcagcagcactcagggcagaaatcactgatgcagagggcctg
ggagtcaaactggaagacagagacactgtcatcaaggagctcaagaagtcacttaagatc
aagggagaggagttgagtgaagcccacgtccgtctcagtctcctggagaagaagctggac
acgtcgactaaagacgcagacgaacgtgtggagaagatccagaccaaactggatgagacc
ctggccctgctcaagaagaaggagaaggagtttgaggagaccatggatgccctgcaggca
gacatcgaccagctggaggcagagaaggcggagctaaagcagcgtctctccagtcaatca
aagagcaccatcgagggcctcagggccccgcctgcctcgggcatcgcctccatcgtcacg
ggatccgccggagccgctcttgccccgggagcagggggtctgtctgggcccatgcaggtg
gtggactcccctctcctccgccagcaggtggaggctcagagactcggtatcaaacacctg
aagaacgagaacaacagactcaaggcagagaagatgagagcccagttagcctctctccct
cccctccacgtccccaagttacacctgagagaggccacctcttcctcctctccccctgct
gaggggcctctccacggggctctctacaggaagacggagcagctcctagggaccctgctc
aagatgaccgccacagttaaagtggttgacatcaccgggaagacaccagtgagtgctagt
gctcagctcttggaccagactgctcggctgcagagcctgagtgacgccctggacaagctg
aagggtgaagtggctgagcatgtggtttcacagcagcctggggcaaaggtctcctctgac
tttgccacctttcccatttcctctttcgtcaaggcgaaggaggagaagcagggaggcacg
gtgtttgtaggccgcgtggccatcccgtgtgccaagggccaggagcaggtgcaccgtctt
gtcctatcacagcaacacctgcagcaagtgcaccgcctcctcatagcgtga
DBGET
integrated database retrieval system
