Oncorhynchus tshawytscha (Chinook salmon): 112259778
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Entry
112259778 CDS
T05605
Name
(RefSeq) FACT complex subunit SPT16-like
KO
K25639
FACT complex subunit SPT16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112259778
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
112259778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPT16
FACT-Spt16_Nlob
Peptidase_M24
Rttp106-like_middle
SPT16_C
DUF1949
Motif
Other DBs
NCBI-GeneID:
112259778
NCBI-ProteinID:
XP_042185408
LinkDB
All DBs
Position
LG10:14867281..14888186
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AA seq
1034 aa
AA seq
DB search
MAVNLDKEAYYRRIKRLYGNWKKGEDEFGKVDAMVVSVGVDEEIVYAKSTALQTWLFGYE
LTDTIMVFCESKIIFLASKKKVEFLKQVAVTKGNENANGVPPITLLIREKNESNKVNFEK
MVEAIRASREGKTVGVFSKDKFPGEYMKSWNDMITAEGLEKVDISAVVAYTIAVKEDGEL
ALMRKAAAVTSDVYSKFFKERVMEIVDADEKVRHSKLAESVEKAIEEKKYLGGADPSTVE
MCYPPIIQSGGNYSLKFSVVSDKNHMHFGAITCAMGIRYKSYCSNLVRTLMVDPPQEMQD
NYSFLLQVEEELLKELKHGIKICDVYNAVLDYVKKEKPDLAAKFTRNLGFAMGIEFREGS
LVLNSKNQYKLKKGMVLSISLGFADLVNKEGKKEEQKKYALFIGDSVQINEDDPATVLTP
VKKKIKNVGIFLKNDEEEDDEEDADDAEELLGKGARGQALLQDRTRNEMTAEEKRRAHQK
ELANQVNEEAKRRLTEQKGEQQVQKSRKSNVSYKNGSQMPREKDIRDMKIFIDKKYETVV
MPVFGIATPFHIATIKNISSSVEGDWTYLRINFYVPGSSLGRNEGNIFPNPDATFVKEIT
YRASNLKAPGDPTVPSTNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSN
PKLKDLYIRPNIAQKRMQGSLEAHTNGFRFTSVRGDKVDILYNNIKHSLFQPCDGEMIIV
LHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKSA
FKNFIEKVETLTKEELEFEVPFRDLGFQGAPYRSTCLLQPTSSSLCNTTEWPPFVVTLDE
VELVHFERVQFHLKNFDVVIVYKDYSKKVTMINAVPVNSLDPIKEWLNSCDIKYTEGVQS
LNWTKIMKTIVDDPEGFFEQGGWSFLDPESEGEGAEDDSESGEDETFNPSADESEAEEED
SDEDYDSESEDSGNDYSASLGSEEESGKDWDELEEEARKADKESHYEDAEETSSAKRKGR
SSAPPPSAKKKRRH
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcggtaaacttggacaaggaagcgtactaccgccgaatcaagcgattatatggcaat
tggaagaaaggagaagatgagtttggcaaagtggatgccatggtggtctccgtcggggtg
gacgaagagatagtgtatgccaaatccactgccctgcagacatggctgtttggttatgag
ctgacagacaccatcatggtgttctgtgagtctaagatcatcttcctggctagcaaaaag
aaggtggagttccttaaacaggtggctgtaaccaagggcaatgagaacgccaacggggtt
ccaccaatcacactgctcatcagggaaaagaacgagagcaacaaggttaactttgagaag
atggtggaggcgatcagggccagtagggagggcaagactgtaggtgtgttcagcaaggac
aagttccccggcgagtacatgaagagctggaacgacatgatcactgccgagggcctggag
aaggtggacatcagtgcagtggtggcctacaccattgccgtgaaggaggatggggaactg
gctctgatgaggaaggctgcagccgtcaccagcgacgtctactccaagttcttcaaggag
cgggtcatggagatcgtggacgcagacgagaaggtgcgccacagtaagctggctgagtct
gtggagaaggcaatcgaggagaagaagtatctggggggagcagacccctccacggtcgag
atgtgttacccccccattattcagagtgggggcaactacagcctcaagttcagcgtcgtc
agcgataagaaccacatgcactttggggccatcacctgtgccatggggatccgctacaaa
tcgtactgctccaacctggtccggaccctgatggtggaccccccacaggagatgcaggac
aactacagcttcctactgcaggtggaagaggaactactcaaagagctcaaacacggtata
aagatctgcgacgtgtacaatgccgttttggactacgtcaagaaggagaagccagacctg
gcggccaaattcaccaggaacctaggatttgccatggggatagagttcagagagggttcc
ctggtcctgaacagtaagaaccagtacaaactgaagaaaggcatggtactgagcatcagc
ctgggtttcgctgacctggtgaataaggaggggaagaaggaggagcagaagaaatacgcc
ctgttcataggagactctgtacagatcaatgaggatgatccagcgacagttctcactccg
gtcaagaagaagataaagaacgtcggaatcttcctaaagaacgatgaggaggaagatgat
gaggaagatgctgacgatgcagaggaactactggggaagggagcgcgtggacaagcttta
ctccaggacaggactaggaacgagatgactgcagaggagaagaggcgggctcaccagaag
gagctggccaatcaggtgaacgaggaggccaagagacgtctgacagaacagaaaggagag
caacaggtccagaagtccagaaagtccaatgtctcctacaagaacggctctcagatgcct
cgagagaaagatattagagacatgaagattttcatcgacaagaaatatgagacggttgtt
atgcctgtcttcggtatcgccacccctttccatatcgctaccatcaagaacatcagttcg
tctgtggaaggagactggacgtacctgaggataaacttctatgttcccggcagctctctg
ggacgcaacgagggcaacatcttccccaaccctgatgccacctttgtcaaagaaattacc
taccgggcgtcgaacctcaaggcgcctggcgacccaacagtcccgtccactaacctacag
aacgccttccgcatcatcaaggaggtgcagaagcgctataagacccgggaggctgaggag
aaggagaaggagggcatcgtcaagcaggactctctggtcatcaacctgaaccgctccaac
cccaaactcaaagacctctacatcagacccaacatcgcccagaagaggatgcaggggtcg
ctggaggcccataccaacggtttccgtttcacgtccgtccgtggggacaaagtggacatt
ctctacaacaacattaaacactccctcttccagccctgtgacggagaaatgatcatcgta
ctgcacttccacctcaagaacgccatcatgtttggtaagaagcgtcacacagacgtgcag
ttctacacagaggtgggtgagatcaccacagacctgggcaagcaccagcacatgcacgac
cgcgacgacctgtacgccgagcagatggagagggagatgagacacaagctcaagtctgcc
ttcaagaacttcatcgagaaggtggagaccctcaccaaggaggagctggagttcgaagtg
cccttccgagacctcgggttccagggcgccccctacaggagtacctgtctgctgcagccc
acctccagttccctgtgtaacaccactgagtggcctccgtttgtggtgactctggatgag
gttgagctggttcattttgagcgtgttcagttccacctgaagaactttgacgtggtcatc
gtctacaaggactacagcaagaaggtcaccatgatcaacgccgtgcccgtcaactcactg
gaccccatcaaggagtggctcaattcctgtgatatcaagtacacagagggggtccagtct
ctgaactggactaagatcatgaagactatagtggatgatccagagggcttctttgaacag
gggggctggtctttcttagacccggagagcgagggggaaggagcagaggatgactctgag
tcgggggaagacgagacatttaacccctcggcagacgagagtgaggcagaggaggaagac
agtgatgaagattatgactcggagagcgaggactccggtaatgactacagtgcgtcgctg
ggcagtgaagaggagagcggtaaagactgggatgagttggaagaggaggccaggaaagcc
gacaaagagtctcactatgaggacgcggaggagacctcgtcggctaagcggaagggtcgc
tcgtcagccccgcctcccagcgccaagaagaaacgccgccactga
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