Oncorhynchus tshawytscha (Chinook salmon): 112259857
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Entry
112259857 CDS
T05605
Name
(RefSeq) RNA-binding protein 4 isoform X1
KO
K13189
RNA-binding protein 14
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112259857
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112259857
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
112259857
NCBI-ProteinID:
XP_024290289
UniProt:
A0A8C8CR19
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All DBs
Position
LG10:complement(17137785..17156214)
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AA seq
654 aa
AA seq
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MDKSNTVKLFVGNLALDTTQEELSAIFEAYGQVVSCSVLRQFAFVHLQGEGAAERAIREL
NGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQELFQTFGKVLECDKVKARLS
SSAGYAFVHMENKEEALQAIEALHGTSFKGRPLSVELSKVQPSKQTPTGKIPCVSCGKQG
HYAGECPVGKSSLEQYQSQAAVLAAAAAAAAGLPLQVQQSVHNSVYNTSTFDPTYAALTG
LTTGTRAEGNPVNQAVYGALATQVYGANVANQLYGVQAANQAAALTQAGATQVYASSMNP
SHAALYGQLSQIAASPAAASAAAAYSTPVYAHAMANHHHPGAIYLAAPGVEMPAAAAAVN
QAYAMAPALYGGAQHAYGHLGMGAAMSASADPSAAIFEAARVQHYFAQGQQVLAEQQNAA
AVAAAQAAKSGERDRSPLRRSAGSLLPDPVMKPFMYQRAPKQRRPLLPTPAGRAAEEAAE
AGEDPMAREQCQQYAEYNHQQYQQLQHLQEQYQQYAEYYHQQHQQHQQLQQLQYYAEYYQ
QYQQYQQLQQYQQLQQYQQLQQLQYAYPPPNHHAMAAIPAHAMAGHAHHHGQPAHVTALD
AALRPVVPASAVAAAMVAAPRVYEPPLPPPPNRKEAVLRRAPELSLHTPEPPFR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagcaacacggtgaagctcttcgtgggcaacctggctctagacaccacccag
gaggagctatcggccatctttgaggcgtacggccaggtggtcagttgcagcgttctccga
cagttcgccttcgtacacctacagggtgagggtgctgcggagcgggccatcagggagctg
aacggcagggagttccgggggaggaacctggtggtggaggagtcccggggcagaccgctc
cactccaccaaggtgtttgtggggaacctgtcgggcatgtgcaccactgaggacctccag
gagctcttccagacctttggtaaagtgctggagtgcgacaaagtcaaagccaggctctcc
tcttctgcaggctacgccttcgtgcacatggagaacaaggaggaggctcttcaggccatc
gaggccctccacggcacctccttcaagggacgcccgctctccgtggagctctccaaggtg
cagccttccaagcagaccccgacggggaagatcccctgtgtgagctgtgggaagcagggc
cactatgccggggagtgccccgtagggaagtcctctctggaacagtaccagagccaggca
gctgtgttagctgcagctgccgccgccgcagccggcctgcccctccaggtccagcaaagc
gtccacaactctgtctacaacacctcgacctttgaccccacctatgcggcgttgacgggc
ctcaccaccggcacgcgggcggaaggaaaccccgtcaaccaggcggtgtatggtgccctg
gcgacgcaggtctacggcgctaacgtggccaatcagctctatggggtccaggcagccaat
caggcggcagcgttgacgcaggcgggcgccacgcaggtgtacgccagctccatgaacccc
agccacgccgctctctacggtcagctcagtcagattgccgccagccccgctgcagcatcc
gctgccgccgcctactccacaccagtttacgcgcatgccatggctaaccaccaccacccg
ggggccatctacctggctgcacctggcgtagagatgcctgcggctgccgcggcagtcaac
caggcctacgccatggcgccggcgctctatgggggagcccagcatgcctacggtcacttg
gggatgggtgccgccatgagcgcctcagcggacccttcggcggccatctttgaagcggcg
agggttcagcactacttcgcccagggacagcaggttctggccgagcagcagaacgcggcg
gcagtggctgcggcacaagcggcaaagtctggagagcgggaccggagtcccctgaggcgc
tctgcggggtccctgctgcccgatcccgtcatgaagcccttcatgtaccagagagccccc
aagcagcgccggccgctgctccccacccccgccgggcgagctgcagaggaagcagcggag
gctggagaggaccccatggctagagagcagtgccaacagtacgctgaatacaaccaccaa
cagtaccagcagctccagcacttacaagagcagtaccaacagtatgctgagtactaccac
cagcagcaccaacagcaccagcagctccagcagctacagtactatgcagagtactaccag
cagtaccagcagtatcagcaactccagcagtaccagcaactccaacagtaccagcaactc
caacagctccagtacgcctacccgcctcccaaccaccacgccatggctgccatccctgcc
cacgccatggcgggccacgcccaccaccacggccaaccggcccacgtcacggcgctggac
gccgccctcaggccagtggtgcccgcctccgccgtggccgccgccatggtggcagcgccc
agagtgtatgagccgccgctgccgccgccaccgaaccgcaaggaggccgtcctccgccga
gcccccgaactctcccttcacacgcctgagccccccttcagatag
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