Oncorhynchus tshawytscha (Chinook salmon): 112259863
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Entry
112259863 CDS
T05605
Name
(RefSeq) actin-related protein 2
KO
K17260
actin-related protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04517
IgSF CAM signaling
otw04530
Tight junction
otw04810
Regulation of actin cytoskeleton
otw05100
Bacterial invasion of epithelial cells
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112259863
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112259863
09144 Cellular community - eukaryotes
04530 Tight junction
112259863
09142 Cell motility
04810 Regulation of actin cytoskeleton
112259863
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112259863
05100 Bacterial invasion of epithelial cells
112259863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259863
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112259863
04147 Exosome [BR:
otw04147
]
112259863
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Arp2/3 complex
112259863
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
112259863
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112259863
Exosomal proteins of other body fluids (saliva and urine)
112259863
Exosomal proteins of bladder cancer cells
112259863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
112259863
NCBI-ProteinID:
XP_024290301
UniProt:
A0A8C8CH86
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All DBs
Position
LG10:complement(17265776..17272622)
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AA seq
394 aa
AA seq
DB search
MDSEGRKVVVCDNGTGFVKCGFAGSNFPEHIFPALVGRPIIRSNTKVGNIEIKDLMVGDE
ASECRSMLEVSYPMDNGMVRSWEDMLHLWDYTFGPERLDISPPDCKVLLTEPPMNPTKNR
EKIAEVMFETYQFHGIYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGYSLPHLTR
RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMLKEKLCYVGYNIEQEQRLATETTVL
VESYMLPDGRQVMVGGERFGAPEALFQPHLINVEGAGVAELLFNTIQAADIDLRSDLYKH
IVLSGGTTMYPGLPSRLEREIKQLYLEKVLQGDTEKLSKFKIRIEDPPSRKHMVFMGGAV
LANIMKDKESFWLSRADYLEKGLRVLDKLGCGVK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgagggcagaaaggttgtcgtctgtgacaatggcacagggtttgtcaagtgt
ggcttcgctggctccaacttcccagagcatatcttccctgccttggtgggtcggcccatc
atccggtcaaacaccaaagttggaaacatcgagattaaggacctgatggtgggtgacgag
gccagtgagtgtcgctccatgctggaggtgtcctaccccatggacaacggcatggtgcgc
tcctgggaagacatgctacacctgtgggactacaccttcggccctgagcgcctggacatc
agccccccagactgcaaggtgcttctgacggaaccgcccatgaaccccactaagaaccgt
gagaagatcgctgaggtcatgtttgagacctaccagttccacggcatctacgtcgccatc
caggccgtgctcactctctatgcccagggtttgttgacaggcgtggttgtggattcaggg
gacggggtgacccatatatgtcctgtgtacgagggctactctctaccccacctcacacgc
aggctggacatcgctggacgtgacatcacgcgctacctcatcaagttgctgttgctgcgt
ggctatgcctttaaccactcggctgactttgagacggtccgcatgctgaaggagaagctg
tgctacgtgggatacaacatcgagcaggagcagagactggctacagagacaaccgtgctg
gtggagtcatacatgctgcctgacggtcgtcaggtgatggtgggaggggagcggttcgga
gcaccggaggccctcttccagccccacctcatcaacgtagagggtgcaggcgtggctgag
ctgctgttcaacaccatccaggctgctgacatagatctcaggtctgacttgtacaagcac
attgttctgtcaggaggcaccactatgtaccccggccttccctccagactggagagggag
atcaaacagctgtacctggagaaggtgctgcagggggacactgagaaactttctaagttt
aagatccgcattgaggaccccccaagccgtaaacatatggtgtttatgggtggagcggtg
ctggccaacatcatgaaggacaaggagtccttctggctgagccgggctgactacctggag
aaaggcctgagggttctggacaaactggggtgtggcgtgaagtag
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