Oncorhynchus tshawytscha (Chinook salmon): 112259942
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Entry
112259942 CDS
T05605
Name
(RefSeq) ephexin-1
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259942
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112259942
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
112259942
NCBI-ProteinID:
XP_042184261
LinkDB
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Position
LG10:21728937..21741951
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AA seq
961 aa
AA seq
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MSFPEHFTSPLPPRPEAKPRPPISRKTPSSNGAPSTPSQLGEMGSTDHNSGGNVNSIVSK
FSHPETTPTTSGDAKLTTNPTLRTRGPRRAPTVKPKPTRHSVQQSGGPDQAPPLPMNRSR
ILWQAKRETPGGEEGNGITVSRSAPGGKEVERQLIGGVEAEAEHGSDTPLNPCFDWECSC
VCHVHMPGMKLVWVPIDEEEKEDEKEEEVKLEREEEESGGEGTSLAIKCPPTPPKQTQSF
PSHFKGSIEEEEESIYETTLLMVDPTPRKICQELDIPLIKVQKPVHWSKLSSSNSEDNTS
VQSDSDPSQTQTTEDASVAIPPRVSLAQDKSKTPGHNLMPIPRGGIALPQPTAEEWRSLR
PSPPNPSASPIVLHRAGNRVPPPQPPKTGISVHSVKQAIKEHEEDGSAEGEEKDTEEDSA
PLRRGCFIAWESRQLDVPLYQTYRATVIHKEIRRQTVCRNTSKASADYHMDWNARRGGVG
VGAVGNGNGAPSATIPLPTLGQSTLWQDLPEVRKSGVLETLSPAQCKYQESMFEVLTSEA
SYVRSLRVLNEHFLESRELEEVLIIRDRKTLFSNVLRVLEVSKSFLMALENRKEESLVFS
DICDIIHFHAQHNFPVYIDYVRNQIYQDKTYTSLMKTNVDFATVITRLQESPQCQRLPFM
SFLLLPFQRITRIKILIENILKRTHSGTKEEQTASNALDSVSKIIEECNTQVGKMKQVEE
LIHLSKTLEFDKLKAIPIISQTRVLEKRGELQEMAKGSTLFNLGHKFTPVYLFLFNDLLI
IATKKGSERFVVLDHAHRTLVQVQPIGDDQVSNPSYEHCFCLTLLENHQGRMMERLMKAP
SQSDLHRWIAAFPDPMKPDGDKEEVVYEDWDCPQVQCVEQYVAQQADELNLEATEIINVV
RKTNEGWYEGIRLSNGQKGWFPVGNAVEITNEHVRRRNLRERYRVIQAASIVTNNMTKTT
P
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccggaacacttcacgtcccccttaccccccagaccagaggccaaaccccgg
ccccccatctctagaaaaaccccttcctccaatggagccccctccaccccctcccagctc
ggagagatgggcagcacagaccacaattcgggggggaatgtcaacagcattgtgagtaag
ttcagccacccagagactacaccaaccaccagtggagatgctaaactaaccaccaatcca
actctccggacccgggggcccaggagggcccccacagtcaaacccaaaccgacccggcac
tctgtccagcagtctgggggtccagaccaggctcctccactgcccatgaataggagccgg
atcctgtggcaggccaaaagagagacccctggaggagaggagggaaatggcatcacagtc
agtcgatcagcacctggcggaaaggaggtagagcgacagctgattggaggagtggaagca
gaggcggagcacggttcagacacgccccttaacccatgctttgactgggaatgcagctgt
gtttgccacgtccacatgcccggcatgaagctggtatgggtgcccatcgatgaggaagag
aaagaagatgaaaaggaggaggaggttaagctggaaagggaggaggaagagagtggagga
gaggggacctccttggccataaaatgcccccccaccccccctaaacagacccaatctttc
ccaagccattttaaaggttccatagaggaggaggaagagtctatatatgaaactactcta
ctaatggtggatccaacacctagaaagatctgtcaagaactggacattccccttatcaag
gttcagaaacctgtccattggtcaaaactgtcctccagcaactcggaggacaacacttcg
gtccagtccgattcggacccatcccaaacccagactactgaggatgcctccgtggctatc
ccacctcgggtatctctcgcccaggacaagtccaaaacacccggccacaacctcatgccc
attcccagggggggtatcgccttgccccagcccaccgcggaggaatggcgctccctgcgc
ccctcaccccccaatccttccgccagtcccatagtactccaccgggcgggcaacagagtc
cccccacctcagccccccaagacaggcatctccgtccattccgtcaagcaagctataaaa
gaacacgaggaggatggaagcgctgaaggagaggagaaggacacagaagaagacagtgcc
cctctcaggagaggatgctttattgcctgggagtccagacagctggatgtgcctctgtac
cagacgtaccgtgctaccgtcatccacaaggagatccggcgccagacggtgtgccgcaac
accagcaaggccagcgctgactaccacatggactggaatgcacgccggggtggagtgggc
gtgggggcggtgggcaatggcaatggggcacccagtgccactattccgttgcccaccctg
ggccagagcaccctgtggcaggacctaccagaagtacggaaaagtggggtgctggagacc
ctcagccctgcacagtgcaagtaccaggagagtatgtttgaggtgttgacatcggaagcg
tcgtacgtgcgttccctacgcgttctcaatgaacacttcctggaatcccgggagctggag
gaggtgctgatcatccgggacaggaagactctcttctccaatgtcctgcgagtcctggag
gtcagcaagagttttctgatggccctagagaaccgtaaggaagagagtctggtgttctcc
gacatctgtgacatcatccatttccatgctcagcacaacttcccggtctacatcgactac
gtccgcaaccaaatctaccaggataagacttacacctccctcatgaaaaccaatgtggac
tttgccacggtcatcacccgtctgcaggagtctcctcagtgccagaggctgccattcatg
tccttcctgctgctgcccttccagcgaatcacacgcatcaagatactcatcgagaacatc
ctgaagagaacacattcggggacgaaagaagagcagactgcctccaacgccttggactct
gtttctaagatcatagaggagtgcaacacccaggtgggaaagatgaaacaggtggaagag
ctgatccacctctccaagacgctggagtttgacaagctcaaggccatccccatcatttcc
caaacccgtgtcttggagaagcgtggggagttacaggagatggccaaagggagtaccctt
ttcaacctgggtcacaagttcacccccgtctacctcttcctcttcaacgacctgctcatc
atcgccaccaagaagggttcagagcgtttcgtggtgttggaccacgcccaccgcaccctg
gtccaggttcagccaataggagacgaccaggtctccaaccctagctatgaacactgcttc
tgtctgactctactggagaaccaccagggacgcatgatggagagactgatgaaggcccct
tcacagtctgacctgcaccggtggatagcagcgttccctgaccccatgaaacctgatggg
gacaaggaggaggttgtctatgaggactgggactgtcctcaggtgcagtgtgtggagcag
tatgttgctcagcaggctgatgagctcaacctagaagccactgagatcatcaacgtggtg
cgcaagacgaacgagggttggtatgaggggatccgtctctccaacggacagaagggttgg
tttcctgtggggaacgctgtagagatcaccaacgagcatgtgaggcggcggaaccttcga
gaacgctatcgggtcattcaggccgccagcattgtcaccaacaacatgaccaagactacc
ccgtaa
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