Oncorhynchus tshawytscha (Chinook salmon): 112259979
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Entry
112259979 CDS
T05605
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112259979 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112259979 (sec24d)
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112259979 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
112259979
NCBI-ProteinID:
XP_024290500
LinkDB
All DBs
Position
LG10:24677078..24704592
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AA seq
1033 aa
AA seq
DB search
MSQQGYVATPPYSQAQPGMGGYPAGFGSAPSQPLYRQYGGPPQSFPAPPTGMMKPVSSPS
GMPPPQVPSHYGSNGQQNGAHPQSYPAPPYGQPLQSPYHSMAHQGPPPAQQLTNQMGAMN
LGYGPGPVQSPQAPPTSHLTQQQFQTAPPTAMGHPPMGPHSSQMAHPQSPLAGPTMAGPQ
SMGGPPPMGGMGRPFPGPPPPGAGGFQQPGPGAAGPPGHPQQLQGQFGGQMAGPGMAGPG
MAGPFQGGAAQMAGPPQKKLDPDSIPSTTQVIEDDQAKRGGQVYTTNLRGQVPPLVTTDY
TVQDQGNASPRFMRCTTYSFPCTADLAKQCQVPLATIIKPFATVPKNETPMYVVNHGETG
PIRCNRCKAYMCPYMQFTDGGRRYQCGFCNCVNEVPAFYFQHLDHMGKRVDFYERPELSL
GSYEFAATLDYCKNNKPASPPAYIFMIDVSYANIKSGLVRLVCDELKTLLDNLPREDGAE
SSMVKVGFVTYNKILHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNFQESRAVINNL
LDQIPDMFADTNESETVFAPVIQAGVEALKAAECSGKLFIFHSSIPTAEAPGKLKNRDDK
KLINTEKEKTLFQPQKAVYEQLSKDCVSQGCSVDLFLFPSQYVDIATMGDVATHTGGSVF
KYSNFQVERDGQHFLSDLRKDVEKAIGFDAIMRVRTSTGFRATDFFGAIHMNNTTDVEMA
AVDCDKAVTVEFKHDDTLSEETGALMQCALLYTTISGQRRLRIHNLSLNCSAQLSELYKS
CETDALINFFAKSAYRAMLNQPLKTVKEILVNQAAHMLACYRKNCASPSAASQLILPDAM
KVFPVYLNSLLKTGPLVGSAELSTDDRAHQRLSTTAMGVEDTQLLLYPRLIPLHNMDVAS
DVVPTPVRCSEERLTDAGMFLLENGCSLFLWLGQACPPEVIQSIFNVPSLAHVPIDLRSL
PELDNPQSQKLRSIIDSLLDQRPSSMKLMIVKQKDRSEIMFRQHLVEDKGLHGGASYMDF
LCYVHREIRQVLT
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagggttatgttgccacacctccctattcccaggcccagcctgggatgggg
ggctacccagccgggtttgggagcgcgccttcccagcccctctatagacaatatggggga
ccacctcaatcattccccgccccaccaacaggtatgatgaagcctgtgtcgtccccttcc
ggcatgcctccaccacaggtccccagccattacggctcaaacggccagcagaacggagct
caccctcaaagctaccccgcccctccgtatggacagccacttcagtccccctatcacagc
atggcccaccagggcccgcccccagcacagcagctcaccaatcagatgggtgccatgaac
ctcggatatggtccagggcccgtgcagagccctcaagcacctcccacctctcacctaacc
cagcagcaattccagactgcccctcccacagccatgggacatccacccatgggcccccac
tcgtctcagatggctcacccacaatcacccctagctggtccaactatggcagggccccaa
tctatgggtggccccccacccatgggaggcatgggtaggcccttccctggcccaccccct
ccaggtgctgggggcttccagcagcctgggcctggagctgccggaccaccaggacatcct
cagcaactacaaggtcaatttggggggcagatggcgggacctgggatggcgggacccggg
atggcgggacccttccaaggtggggcagcacaaatggccggcccacctcagaaaaagctg
gatcctgactccatccctagcacaacacaagtcatcgaggacgaccaagccaaacgaggg
ggacaggtgtacaccacgaacctcagaggccaggtgcccccgctggtcaccactgactat
acagtacaggaccaaggaaacgccagcccaaggttcatgcgttgcaccacatactctttc
ccctgcacggctgacctggctaagcagtgccaagttcccctggccaccatcatcaaaccc
ttcgccacagtgccaaagaatgagactcctatgtacgtcgtgaaccatggtgagactggc
ccaatccgctgtaaccgctgcaaggcctacatgtgtccctacatgcagttcacggacggt
ggccgccgctaccagtgtggcttctgcaactgcgtcaacgaagtgccagccttttatttc
caacacctggaccacatgggcaaaagggtggacttctacgagaggccagagctgtcgctg
gggtcctacgagttcgccgccaccctggattattgcaagaacaacaagccagccagtcct
ccagcgtacatcttcatgatcgacgtgtcctatgccaacatcaagagcggactggtcaga
ctggtgtgtgatgagctgaagaccctgctagacaacctgcccagagaggatggtgctgag
agctcgatggtgaaggtgggcttcgtcacctacaacaagatcctacatttctacaacgtg
aagagtgccctggcccagccccagatgatggtggtatccgacacggcagagatgttcgtc
ccgctgctcgatggcttccttgtcaacttccaggagtcgcgggcagtcatcaacaatctc
ctagaccagatccctgacatgtttgccgacaccaatgagagcgagacggtctttgccccc
gtcatccaggctggggtagaagcactgaaggcagcagaatgcagcggcaagctgttcatc
ttccactcctccatccccaccgccgaggcccctgggaaactgaagaacagggacgacaag
aagttgataaacacagagaaggaaaagactctgttccagccccagaaggctgtctatgag
cagctgtccaaggactgtgtgtctcagggctgcagcgtggacctcttcctcttccccagc
cagtacgtggacatcgccaccatgggagacgttgccacacacacaggaggctccgtcttc
aaatacagcaacttccaggtggagagggatggacagcatttcctgagtgacctgaggaag
gatgtggagaaggccatcgggtttgatgccatcatgagagtccgaaccagcacaggcttc
agggctacagacttctttggtgccatccacatgaacaacaccacagacgtggagatggct
gccgtggactgtgacaaggctgtgacggtggagttcaaacacgatgacacacttagcgag
gagacgggcgctctcatgcagtgtgcattgctgtacacgaccatcagcggccagcggcgt
ctgcggatccacaacctcagtctgaactgcagcgcacagctgtctgagctctacaagagc
tgtgagacggacgccctcatcaacttctttgccaagtcagcataccgtgccatgctgaac
cagcccctgaagacggtgaaggagatcctggtcaaccaggcggcccacatgctggcctgc
tacaggaaaaactgtgccagtccctccgctgccagccagctgatcctacctgatgccatg
aaggtgttcccagtctacttaaacagcctgttgaagactggtcccctggtgggcagcgct
gagctctctacagacgacagggctcaccagagactcagcaccacagccatgggggtggag
gatacccagctgctgctctatccacgccttatcccactgcacaacatggacgttgccagt
gacgtggtgccaactccggtgcgctgctctgaagagcgcctgacagatgccggcatgttc
ctgctggagaatgggtgctccctcttcctgtggctgggccaggcctgccccccagaggtg
atccagagcatcttcaacgtgccctccctcgcccatgtgcccattgacctgaggtcccta
ccagagctggataacccccagtctcagaagctgcgctccatcattgactccttgcttgac
cagaggcccagctccatgaagctcatgattgtgaagcagaaggaccggtctgagattatg
ttccgccagcacctggtagaggacaaggggctccacggtggagcctcctacatggacttc
ctgtgctatgtccaccgcgagatcagacaagtcctcacttaa
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