Oncorhynchus tshawytscha (Chinook salmon): 112259987
Help
Entry
112259987 CDS
T05605
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112259987 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112259987 (dhx15)
03009 Ribosome biogenesis [BR:
otw03009
]
112259987 (dhx15)
Enzymes [BR:
otw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112259987 (dhx15)
Spliceosome [BR:
otw03041
]
Complex A
U2 snRNP components
U2 related factors
112259987 (dhx15)
Complex B
112259987 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
112259987 (dhx15)
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
90S particles
Helicases
112259987 (dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_25
SRP54
Cas3-like_C_2
nSTAND3
nSTAND_NTPase5
AAA_29
GvpI
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
112259987
NCBI-ProteinID:
XP_024290514
UniProt:
A0AAZ3NY20
LinkDB
All DBs
Position
LG10:complement(25583844..25617825)
Genome browser
AA seq
763 aa
AA seq
DB search
MVMGKEKGIGPGRYKKNIFKKEALSRLSHYSHSCLDHRRDRDRDERSKDRDRDRDAKLSG
MALNPAVGSAGLSHKQTAMQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKERFNDILGR
HQSFVLVGETGSGKTTQIPQWCVDMVKGLGGPKKAVACTQPRRVAAMSVAQRVADEMDVK
LGQEVGYSIRFEDCSSAKTFLKYMTDGMLLREAMNDPLLERYGVVILDEAHERTLATDIL
MGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYL
EAAIRTVIQIHMCEEEEGDCLLFLTGQEEIDEACKRIKRDIDDLGHDAGDIKIIPLYSTL
PPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR
VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVL
QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYVAALNDDGDLTELGSMMAEFPLDPQLA
KMVIASCEFNCSNEILSITAMLSVPQCFVRPTEARKAADESKMRFAHIDGDHLTLLNVYH
AFKQNHESTQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFTSRDYYINIRRA
LVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVMYNEFVLTTKNYIRTCTD
IKPEWLVKIAPQYYEMGNFPNCEAKRQLERIVAKLSTKEYSQY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgggaaaagagaagggaattgggcctggccgatataaaaaaaatatatttaaa
aaagaagctttgtctcgtctgtcacactactcacattcatgcctcgaccacaggcgagac
agggaccgcgacgagcggtcgaaggacagggacagagaccgggatgccaagctctctggc
atggccctgaacccggctgttggcagcgcaggcctctcccacaagcagacggccatgcag
cagcagatcaacccgttcaccaacctgccccacacgccgcgttactacgagatcctgaag
aagaggctgcagctgccagtgtgggagtacaaggagcgcttcaacgacatcctgggacgc
caccagagtttcgtgctcgtcggagagacgggctcaggcaagaccacgcagatcccccag
tggtgtgtggacatggttaaggggttgggcggacctaagaaggcagtggcctgtacccag
cccaggagggtggcagccatgagcgtggcccagagggtggccgacgagatggacgtcaag
ctgggccaggaggtcggttactccattcgattcgaggactgcagctcggccaagaccttc
ctcaagtacatgacagacggtatgttgctgcgggaggccatgaatgaccctctgctggag
cgctacggcgtcgtcatcctggacgaggctcacgagagaacgcttgccacagacatcctc
atgggtgtcctcaaagaggtggtccgacagaggtcagacctcaaggtcatcgtcatgagc
gccacgctggatgccggcaagttccaggtgtactttgacagctgtccgctgctaaccatc
ccgggacgcacgcacccggtagagatcttctacacgccggaacctgagagggactacctg
gaggcagccatccgcaccgttatccagatccacatgtgtgaagaggaggagggcgactgt
ctgctcttcctcactggacaagaggaaatcgacgaggcctgcaagcgcatcaagagggac
atcgacgacctgggacacgacgcgggggacatcaaaatcatcccgttgtactcgacgctg
ccgccccagcagcagcaaaggatctttgagccgccaccaccccgcaagcccaacggagcc
atcgggaggaaggtcgtggtttcgacaaacatcgctgagacatccctgaccattgacggt
gtggtgtttgtaattgatcccggatttgccaagcaaaaggtgtataaccctcgtatcaga
gtggagtccctcctggtgacggccatcagcaaagcctcggcccagcagagggcagggcgc
gccgggaggacacgcccagggaagtgcttccgcctctacacagagaaggcctacaagacc
gagatgcaggacaacacgtatccagagattttgaggtccaacctgggttcggtcgtgctg
cagctcaagaagctaggtatcgacgacttggtccatttcgacttcatggacccaccagca
ccggaaaccctgatgcgggccctggagctgctcaactatgtggcggcgctcaacgatgac
ggcgacttgacggagctaggctccatgatggccgagttccccctagacccgcagctagcc
aagatggtgattgcctcctgcgagttcaactgctccaatgagatcctgtccatcacagcc
atgctgtcagtcccacagtgcttcgtacgacccacggaggctaggaaggcggccgacgag
tccaagatgcgtttcgcccacattgacggagaccacctgaccctcctcaatgtctaccac
gccttcaaacagaaccatgagtcgacacagtggtgctacgacaactttgtgaactacagg
tcgctgatgtcggccgacaacgtgcgccagcagctgtcccggatcatggaccgcttcagc
ctgccccgccgcagcacagagttcaccagcagagactactacatcaacattcgcagagcg
ctggtcacaggattcttcatgcaggtagcccatttggagcgtacaggccactacctgact
gtgaaggacaaccaggtggtccagctgcacccctccactgtgctggaccacaagccggag
tgggtgatgtacaatgagtttgtgctgaccaccaaaaactacatccgcacctgcaccgac
atcaaaccagagtggctggtgaaaatcgccccgcagtactatgagatgggaaacttcccc
aactgtgaagccaagagacagttggagcgcatcgtagctaaactctcaaccaaggaatat
tctcagtactaa
DBGET
integrated database retrieval system
