Oncorhynchus tshawytscha (Chinook salmon): 112260042
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Entry
112260042 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor-associated protein-like
KO
K08341
GABA(A) receptor-associated protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04068
FoxO signaling pathway
otw04136
Autophagy - other
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
otw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
112260042
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112260042
04136 Autophagy - other
112260042
04137 Mitophagy - animal
112260042
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112260042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112260042
04121 Ubiquitin system [BR:
otw04121
]
112260042
03029 Mitochondrial biogenesis [BR:
otw03029
]
112260042
Membrane trafficking [BR:
otw04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
112260042
Ubiquitin system [BR:
otw04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
112260042
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112260042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
112260042
NCBI-ProteinID:
XP_042184373
LinkDB
All DBs
Position
LG10:27363325..27369778
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AA seq
164 aa
AA seq
DB search
MLLLYPSAAVVLGKNPSKTADPCSIELLLEDISDRHPVILLTMKFQYKEEHPFEKRRSEG
EKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRAEDALFF
FVNNVIPPTSATMGLLYQEHHEEDFFLYIAYSDESVYGDNHTEI
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgttgttattgtatccgtccgctgcagtcgtactaggaaagaatccgagcaaaacagca
gacccgtgttccatcgaattgttacttgaggatatctcagatcgacaccctgtcattctt
ttgacaatgaagttccaatacaaagaggaacatccatttgaaaagagacggtctgagggc
gagaaaataaggaagaagtatccggacagggtgcctgtaattgtggaaaaagcccccaaa
gcaaggataggagatttggacaagaagaaatacctcgtgccctccgacctcacggtgggc
cagttctacttcctcatccgaaaacgaatccacctgcgggcagaagacgccttattcttc
tttgtaaacaacgtcattccacccacttcagccaccatgggcctgctataccaggagcac
catgaagaggactttttcctctacattgcctacagtgatgagagtgtctatggagacaac
catacagaaatttga
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