Oncorhynchus tshawytscha (Chinook salmon): 112260045
Help
Entry
112260045 CDS
T05605
Name
(RefSeq) homeobox protein SIX2 isoform X1
KO
K19472
homeobox protein SIX2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112260045
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
112260045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
HTH_NDX
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
112260045
NCBI-ProteinID:
XP_024290600
UniProt:
A0A8C8GW49
LinkDB
All DBs
Position
LG01:complement(91688240..91691536)
Genome browser
AA seq
289 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRNVLREWYTHNPYPSPREKRELAEGTGLTTTQVSNWFKNRRQRDR
AAEAKERYEENNENSNTNSHNPLTSSMNGNKTLLGSSDDDKTPSGTPDHISSSPAMLLAS
NSGLQMHGLAPPPGPSAILVSSLDSVHHHHSLHDTILNPMSSNLVELGS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttccaacttttggctttacgcaagagcaagttgcgtgcgtctgcgaggtc
ctccaacagggtggaaacatcgaacggctcgggcgatttttgtggtctttacccgcgtgt
gagcacctccacaaaaatgaaagtgttctcaaagctaaagctgtggtcgcctttcacaga
ggcaatttcagagagctttataaaatccttgagagccaccaattttcccctcacaatcac
ccgaagctgcaacagctttggctcaaagcacactacatcgaggcggagaagctccgaggc
cgccctctcggggctgtgggaaagtaccgcgtccgcagaaagttccccctgcctcggtct
atctgggacggcgaggagacaagttactgtttcaaagagaagagcaggaacgtactcaga
gaatggtacacgcataacccctacccttccccgcgggagaagagggagctcgccgagggc
acagggttgacaaccacacaagtcagtaactggttcaaaaacagacggcaaagagaccgc
gcggcagaagctaaggaaaggtacgaggaaaacaacgaaaactccaacaccaacagccac
aacccattgacttcttccatgaatggaaataaaacacttttggggagctcagacgacgac
aaaacgccttctgggactccggatcacatttcctcgagcccggcaatgctcctcgcttca
aactccgggctgcagatgcacggcctcgcgcctccacctgggcctagcgccatcctcgtg
tccagccttgactccgtgcaccatcatcactctttgcacgacactatactgaaccctatg
tcgtctaacctggtcgaactcggctcttaa
DBGET
integrated database retrieval system
