Oncorhynchus tshawytscha (Chinook salmon): 112260070
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Entry
112260070 CDS
T05605
Name
(RefSeq) RNA-binding protein 4.1 isoform X1
KO
K13187
RNA-binding protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112260070
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112260070
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
RRM_7
RRM_occluded
Calcipressin
zf-CCHC_3
HTH_TIMELESS
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
112260070
NCBI-ProteinID:
XP_024290644
UniProt:
A0A8C8CUG1
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All DBs
Position
LG10:complement(29131838..29141051)
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AA seq
459 aa
AA seq
DB search
MGRDCAVASRRGAISSRRPVASHSESRNIITMVKIFIGNLSPDTTAEELRSLFSQYGKIS
ECDIVKNFGFVHMDDKAKAEDAIKNLHHYELNGQAMNVEMSRGRPKASTKLHVGNINSSC
TNQELRAKFEEYGPVVECDIVKDYAFVHLERVEDAMEAVSGLDNTAFQGKLLSVKLSTSR
LRTTPGMGERTGCYRCGQEGHWSKECPLDTLGNYREGAEPRSDGFDGGAPRFGGGSRSGR
VYQRGFSDGDPGYSGSYASVHDFGNRGSVYGSGSVPGYGRGAGYETAMSYSVPQGYGMSA
AEQCMARTYASEAAYGCTSSSYGVIPANPVRRSSYEDRDPYGVVDFYEKYRARSYGASYF
EERRSVPLPAPPPPSSSAIMRERLPPSSLDLYERCPLPPLPASISSYYSRDRSPIRRIPA
DTEGYAYERARLSPVSSLPRSLAYDIPRDPYAERARYAY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagattgtgctgtggctagcaggcgcggcgccatttcatctcggagaccagtg
gcatcccacagtgaaagcaggaacatcatcaccatggtgaaaatcttcattgggaatttg
tctccagacaccacggcggaggagctgcgctccctcttctcccagtatggcaagatctca
gagtgcgacatcgtcaagaactttggctttgtgcacatggatgacaaagctaaggcagaa
gatgccatcaagaatctccaccactacgagctcaacgggcaggccatgaatgtggagatg
agccgtggcagacccaaagcctctaccaagctccacgtgggtaatatcaacagcagctgt
accaaccaagaactacgggccaagtttgaggagtacggcccagtggtggagtgtgacata
gtgaaggactacgcctttgtccacttggagcgtgtggaggatgccatggaggctgtcagt
gggctggacaacacagccttccaaggcaaactgctgagcgtgaagctttcgactagccgc
ctgcgtactacgcctggcatgggagagaggactggttgttatcggtgcgggcaggaaggc
cactggtccaaagaatgtccgctcgacacgttgggcaactacagagagggtgccgagcca
cgctctgacggattcgatggcggtgcccccaggttcggcggggggagtcgcagcggtcgc
gtttatcaacggggcttcagtgacggcgatccaggttacagtggcagctacgcttccgtg
cacgactttggcaacagagggtctgtttacggcagcggcagtgtacccgggtatggcagg
ggcgcgggctacgagaccgcaatgagttacagtgtcccgcagggttatggaatgagcgct
gccgaacaatgcatggcccggacatacgccagcgaggcagcgtacggctgcaccagctcg
agctatggtgtgatcccagccaacccagtgcgccggtcatcttacgaggaccgggatcct
tatggtgttgtggacttctacgagaagtaccgggctcgctcgtatggagccagttatttc
gaagagcgccggtctgtccctttgccagccccacctcccccctcctcctcggccataatg
agggagcgcctgccgccctctagcctcgacctatacgagcgctgtcccctccctcctcta
ccagcctccatctcctcatactactcccgcgaccggagcccgatccggcgaatccctgct
gatactgagggctacgcgtacgagcgcgcgcgcctctccccggtgtcctccctccccaga
agcttggcttatgacatcccgcgggacccctacgccgagcgggcgcgctatgcttactaa
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