Oncorhynchus tshawytscha (Chinook salmon): 112260078
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Entry
112260078 CDS
T05605
Name
(RefSeq) metastasis-associated protein MTA2 isoform X1
KO
K11660
metastasis-associated protein MTA
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112260078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112260078
03036 Chromosome and associated proteins [BR:
otw03036
]
112260078
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
112260078
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
112260078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
112260078
NCBI-ProteinID:
XP_024290667
LinkDB
All DBs
Position
LG10:29270870..29303691
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AA seq
672 aa
AA seq
DB search
MAANMYRVGDYVYFENSSSNPYLIRRIEELNKIMVNPMTANGNVEAKVVCLFRRRDISGN
LNTLADSNARDFEEESKQPTVSEQQKHQLKHRELFLSRQFESLPATHIRGKCNVTLLNET
DVLAGYLEKEECFFYSLVFDPVQKTLLADQGEIRVGSKYQAEIPDKLAEGETHTRIQEKL
ETKVWDPDNQLKDPQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHA
MDTLQKNGYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDF
LPWKSLASVVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIMAPGNKP
GMNGAAGFQKGLSCESCHTAQSAQWYAWGPPNMQCRLCASCWIYWKKYGGLKTPTQLEGA
ARSVSESTPRGHMTRQEVQGLSPFTTSGGRAKLLAKNRQTFILQTTKLTRIARRVCTDIL
QPRRAARRPYASINANAVKAECMIRLPKATKAPIKNRSIPRPPLATIVKELAIQAPLKLK
APRGAPTPINRNQANQPRGGSGLLGKRPFDSSSQAAGLPFPTNGRPFTSGMRTTSQSVIK
RQKVNQGDAPNPVVFVATKDTRALRKHLTQSEMRRAARKPHLPVRVKLPLGPRTLVLPTL
PSSTSEPIVLED
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacatgtaccgagtgggagattacgtgtactttgagaattcctccagcaac
ccctacctaatccgcagaatagaagagctcaacaagatcatggttaatccaatgacggcc
aatgggaacgtggaagccaaggtggtgtgtctgttccggaggcgggacatctcgggcaac
ctcaacactctggccgacagcaacgcgagagactttgaggaggagtccaagcagcccact
gtgtctgaacagcagaaacaccagctgaagcaccgagagcttttcctctctcggcagttt
gagtctctacctgcaactcacatacgagggaaatgtaacgtcaccctcctcaacgaaacg
gacgtcctcgccgggtacctggagaaagaggagtgtttcttttattcgctggtgtttgac
ccggttcagaagacccttctggcggaccagggagagatccgcgtaggctccaagtaccag
gccgagatccctgacaagctcgccgaaggtgaaacacacacccgtatccaggaaaagctg
gagaccaaggtctgggaccctgacaaccagctcaaagacccccagattgaccagttcctg
gtggtggctcgtgctgtggggacgtttgccagagccctggactgcagtagctccatccgt
caacccagcctgcatatgagtgctgcagcagcctccagagacatcacactgttccatgcc
atggacaccctgcagaagaacggttacgacctagccaaggccatgtccacgctggtcccg
cagggcgggccggtcctctgccgtgacgagatggaggagtggagtgcctcggaggccatg
ctgtttgaggaggccctggagaagtacggcaaggactttaacgacatccgccaggacttt
ttaccatggaagtcactagccagtgtggtccagttctactacatgtggaagactactgac
cgctacatccaacagaaacgactaaaggcagcagaagcagacagcaagctgaagcaggtg
tacatccccacctacaccaaacccaaccccaaccagatcatggctcctggtaacaagcct
ggcatgaacggggccgctggcttccagaaaggactgagctgcgagagctgccatactgcc
cagtcagcacagtggtacgcatggggtcctcccaacatgcagtgcagactgtgtgcctcc
tgctggatctactggaagaagtatggaggcctgaagacccctacacagctagagggcgcc
gcaagatctgtctcggagtccactccgcgcggtcacatgacccgccaggaggtgcaaggc
ctgtccccgttcacgacgagcggggggcgcgccaagctgctggccaagaaccggcagaca
ttcatcctgcagaccaccaagctgacgcgtattgcccgccgcgtctgcactgacatactg
cagccccgccgcgcggcacgccgcccctacgcctccatcaatgcaaacgccgtcaaggcc
gagtgtatgataaggttgcctaaagcaactaaggcccctataaagaaccgctctatccct
cgaccaccgctggccactatagtgaaggaactggccatccaggctccactcaagctgaag
gcccccagaggcgctcccacacccatcaaccgcaaccaggccaaccagccccgcggggga
tcaggcctgctcgggaagaggccctttgacagtagctcacaggcggcagggctgccgttc
cccaccaatgggaggccgttcacatcaggcatgaggaccacctcacagtcggtgatcaag
cgtcagaaagtgaaccagggagacgcacccaaccccgtggtgtttgtggccacgaaagac
accagggctctgagaaaacacctgactcagtctgagatgcggcgtgcagccaggaaacct
cacctcccggtcagagtcaagctgcccctaggtccccggaccctggttctgcccaccctg
ccatccagcaccagcgagcccatcgtcctggaggactaa
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