Oncorhynchus tshawytscha (Chinook salmon): 112260133
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Entry
112260133 CDS
T05605
Symbol
ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112260133 (ift57)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
112260133 (ift57)
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Gene cluster
GFIT
Motif
Pfam:
IFT57
TPR_IF140_C
MCPsignal
HBM
ISG65-75
Mod_r
Med9
DUF1664
Prominin
Motif
Other DBs
NCBI-GeneID:
112260133
NCBI-ProteinID:
XP_024290779
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Position
LG10:37226794..37246854
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AA seq
414 aa
AA seq
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MVDDNRRGDDERGPGAAYQMFVVMEDLLDKLKLLDYEEEVLAKHNMKALSRHYFASSAYM
PSNPGEQFFMFTIIASWLINAAGRPFEQPQEYDDPNATVSNILSQLRAFGGLVDFPPSKL
KAGSGEHVCYVLDRLAEEALKERVFSWRRPNYPTEEMEEESVMEDDAELTLSKVEEEMTE
EPDDCEEENVMDLEALKSRTNQSEARLSSKPDNILESNMDAAEWNLEVERVLPQLKVTIR
TDHKDWRIHVDQMHQHKDGIKSSLKEAKGYLDKLQEEIGKTLEKVGSREKYINNQLEHLI
QDYRSAQSKLSEARECYQQGSGGVTERTRVLAEITEELEKVKQEMEEKGSSMSDGAPVVK
IKQSLTKLKQEIVQMDIRIGVVEHTLLQAKLKEKSNMTRDMHATNIPEPAIGAY
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgacaatagacgaggggacgatgaacggggtcctggagcagcatatcaaatg
ttcgtggttatggaggacctgctggacaaattgaagcttctggattatgaagaggaagtt
ctggcaaagcacaacatgaaagctctatccaggcattactttgcatccagtgcctacatg
ccatcaaatccaggggagcaattcttcatgtttaccataatcgcgtcttggctcatcaat
gcagcagggagaccctttgagcagcctcaggagtatgacgaccccaacgccactgtgtcc
aacattctctcacagttgagagcttttggaggactggtagactttcctccctccaaacta
aaagctggttcaggggaacatgtttgctatgtgctggatcggctggctgaagaggctctg
aaggagagagtgttttcctggagaagaccaaactaccctacagaggagatggaagaagag
tctgtgatggaggatgatgcagagctgactctcagtaaagtggaagaggagatgacagag
gaaccagatgactgtgaggaagagaatgtcatggatctagaggcacttaaatcaaggacc
aatcaaagtgaggccagattgtcttcaaagccagacaatatactggaatcaaacatggac
gctgccgagtggaatctagaggtcgagcgggttctcccacaactgaaggtcacaatcaga
acagaccacaaggactggaggatccacgtggaccaaatgcatcagcacaaagacgggatc
aaatcatctctcaaggaggccaagggctacctagacaagctgcaggaggagattggtaag
acactggagaaggtgggcagcagagagaaatacatcaacaaccagctggaacaccttatc
caggactaccgcagcgcccagtccaaactcagcgaggcaagggagtgctaccagcaggga
agtggtggagttacagagaggaccagagttctggctgagatcacagaggagttggagaag
gtgaagcaggagatggaggagaagggcagcagtatgtctgatggagccccggtggtgaaa
atcaagcagagtctgaccaagctcaagcaggagattgttcagatggacattcggattgga
gtggtagagcacacactactgcaggccaagctaaaggagaagtccaacatgactcgagac
atgcacgccaccaatatcccagagcctgccatcggcgcatactga
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