Oncorhynchus tshawytscha (Chinook salmon): 112260154
Help
Entry
112260154 CDS
T05605
Name
(RefSeq) nucleolar transcription factor 1-A isoform X1
KO
K09273
upstream-binding transcription factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112260154
03021 Transcription machinery [BR:
otw03021
]
112260154
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
112260154
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
112260154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112260154
NCBI-ProteinID:
XP_024290813
UniProt:
A0A8C8EWI8
LinkDB
All DBs
Position
LG10:complement(35975070..35995869)
Genome browser
AA seq
714 aa
AA seq
DB search
MNGSSSVPSASQTIQIKTEPVVDAWSKEDCLTLLERIRSLLPDGDAMKYKTTESHFDWEK
VCFGDFTGDMCKQKWAKVSTEVRKFRTMTELIVDVIEFVKNPYKGKKLKTHPDFPKKPLT
PYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKESFEKNMA
RFKEDHPELIEERKKSDLPEKPKTPQQLWYNHEKKTYMKLHPDVSQKELKEALRRQWSQL
SDKKRLKWISKALELQKDYAGSMKVYQEAHPDAEEHVKSVLTKAERQLKDKFDGRPTKPP
PNGYSLYCAELMVNMKDVPSTERMVLCSKQWKVMTQKEKDMFQKRCEQKKKQYEIDLQRF
LESLPEEERDRVMTEEKLGGSRLGMGAAGSPHGAKSPSAKVGLTKLQQERCREAELEHWV
HAGLTAKEKRDGKKRTKIPETPKTAEEMWQQSVIGDYLAKYRSDRKKAQSAMESAWKAME
KKEKIPWIKKAADDQKRYEVQYRPVRELLESRMPQSGAGQRKPKFEGEPKKPPVSGYQMF
SQELLTNGELNHFSLKERMVEIGKRWHKLSQSHKDKYKKLVEELQIEYKAELEAWVKSLS
PQERAVYKEFSTTKRRSTTKARGAQGAKVCLMATVKGKVVGARAAAEVGGGKRAMAYRAK
QDTSDSDEDDKTDSSDSDDEESSGSSDSEDENDDDPSEGSSSSSSEDSSDSDSD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagcagcagtgtgccctctgcctcccagaccattcagataaaaaccgagcca
gttgtggatgcatggagtaaggaggactgcctcactcttttggagaggattcggagcttg
ttgcctgatggtgatgccatgaaatacaaaaccaccgagtcccactttgactgggagaag
gtctgcttcggagactttactggcgacatgtgcaaacagaagtgggcgaaggtgtctact
gaggtgcggaagtttaggactatgacagagctcatagttgacgtcattgagtttgtgaag
aacccttacaaagggaagaaattgaagacacacccagacttcccaaagaaaccacttacg
ccgtatttccggttctttatggagaagcgagctaagtatgccaagatccacccggagatg
agcaaccttgacctcaccaagattctgtccaagaaatacaaggagctcccagacaagaaa
aagcaaaagtacatcacagagtttcagcgagagaaggagtcatttgagaagaatatggcc
cgattcaaagaggaccacccggagttgatagaggagagaaagaagtcggaccttcctgag
aagcccaagacgccccagcagctgtggtacaaccatgagaagaagacctacatgaagctc
caccctgatgtgagccaaaaggagctgaaggaggctctgaggagacagtggtcccagctc
tcagacaagaagagactaaaatggatcagcaaggccctggagctgcagaaagactatgcg
ggcagtatgaaggtctaccaagaggcccatccagatgctgaagagcacgtcaagtccgtc
ctcaccaaagctgagcggcagctcaaggacaagtttgacggcaggccaaccaaaccaccg
ccgaacggttactccctatactgtgccgagctgatggtgaacatgaaggatgttcccagt
acggagcgtatggtgctgtgcagtaagcagtggaaggtgatgacgcagaaggagaaggac
atgtttcagaaacgctgtgagcagaaaaagaagcagtatgaaattgacctacagaggttt
ctagagagtctcccagaggaggagagggaccgcgtgatgacggaggagaagctggggggc
tcgcggctgggcatgggggctgctggcagcccgcatggagccaagtccccctccgccaag
gtgggtctcacaaaactacaacaggagcgctgtcgcgaagctgagctggagcactgggtg
cacgctggcctgacggcgaaagagaagcgtgacggcaagaagaggaccaaaatccctgag
acgcccaagactgccgaggagatgtggcaacagagcgtcataggagactacctggccaag
tacaggagtgaccgcaagaaggcccagagtgctatggagtcggcttggaaggccatggag
aagaaggagaagatcccgtggatcaagaaggcggccgatgaccagaagcgatacgaggtt
cagtaccggcccgtgagggaattgttggagtctagaatgccccagtcaggagcaggccag
aggaaacccaagtttgaaggggagcccaagaagccaccagtgagcggctaccagatgttc
tcccaggagctgctgaccaacggcgagctaaaccacttcagcctgaaggagcgcatggtg
gagatcggcaagcgctggcacaaactcagccagagccacaaggacaagtacaagaagctg
gtggaggagctgcagattgagtacaaggccgagctggaggcttgggtcaagtctctctct
ccccaggagcgagctgtttataaagagttctccaccacaaaacggcggagcaccaccaaa
gcgcggggcgcccagggggccaaggtgtgtttgatggcgacagtgaaggggaaggtggta
ggtgccagagccgcagcagaggtcggagggggcaagcgggccatggcgtaccgggccaag
caggatacgtccgactcggacgaggatgataagacggactcgtcagactctgatgatgaa
gaatcgtctggcagctccgacagcgaagatgagaatgacgacgacccatccgagggctcc
agcagctcttcctcagaggacagcagtgactcggactcagattag
DBGET
integrated database retrieval system
