Oncorhynchus tshawytscha (Chinook salmon): 112260190
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Entry
112260190 CDS
T05605
Symbol
sec22ba
Name
(RefSeq) vesicle-trafficking protein SEC22b-B
KO
K08517
vesicle transport protein SEC22
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112260190 (sec22ba)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112260190 (sec22ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112260190 (sec22ba)
Membrane trafficking [BR:
otw04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
112260190 (sec22ba)
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GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
Motif
Other DBs
NCBI-GeneID:
112260190
NCBI-ProteinID:
XP_024290873
UniProt:
A0A8C8C2K3
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Position
LG10:44536411..44540698
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AA seq
215 aa
AA seq
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MILLTMIARVADGLPLAASMQEDEQSGRDLQHYQSQAKQLCRKLNAQSPNRCTLEAGVMS
FHYVIEHGVCYLALCEAVFPKKLVFGYLEVLQTEFNEQHGKKVPTVSRPYSFIEFDVYIQ
KTKKNYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDTKASDLSSLSKKY
RSDAKYLNTRSIYAKIAAGAVFFITLIVYMRFWWI
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgattttactgacaatgatcgctcgagtagcagatggtctgccgcttgctgcatcgatg
caagaagacgagcagtcaggaagagacttgcaacattaccagagccaggctaagcagctg
tgccgcaaactaaatgcccagagtcccaatagatgtactctggaggctggggtcatgtcc
ttccactatgtaatagaacatggcgtgtgctacttggccttgtgtgaagctgtgtttccc
aagaaactggtatttgggtacctggaagtcctccaaacagaattcaatgaacagcatgga
aagaaagtccccaccgtctccaggccatactctttcattgagtttgacgtgtacatccag
aagacaaagaagaactacattgacagcagggcacggaggaacctgggcagcatcaacaca
gaactgcaggacgtccagcgtatcatggtggcaaacattgaagaggtcctgcaacgagga
gaggccttatctgctctcgacaccaaagccagcgatctgtccagcctttcaaagaagtac
cgcagcgacgccaagtacctcaacacccgatccatctatgccaagatagcagcaggggca
gtcttcttcattacactcatcgtctatatgcgtttctggtggatctga
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