Oncorhynchus tshawytscha (Chinook salmon): 112260226
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Entry
112260226 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: SH3-containing GRB2-like protein 3-interacting protein 1
KO
K20065
SH3-containing GRB2-like protein 3-interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112260226
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112260226
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
muHD
Adap_comp_sub
Motif
Other DBs
NCBI-GeneID:
112260226
NCBI-ProteinID:
XP_024290933
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Position
LG10:43100534..43132877
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AA seq
949 aa
AA seq
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MMEGLKKRTRKAFGLRKKEKDTDFMGSPDKDGVSARKKKTNGAPNGYYGEIDWDRYATPD
VDAEGFSLRPGEEEETGPKGKQHFLSSSDSEDEDDKRKFKIKIKPLPSDTAKCAVPSMDE
LKASVGGLALSPSLRRSPRRSPGSIKRHLSCEEIARPRRSTPTPSPAPETQSERVSKSRR
ASPAFYGLPPETTSEARRYDSNRNDGEEIARPIRSTLTPSPALGTQSERVSQSRRASPAF
YGLPPETTYETHRYDSNRNDVVCIEADAWCDSRPYPDSLLTRSFPTGAPPPLPPKNIPAA
SQGYSLTDSYADLPNGRIVPSPNPIYLNVQSPASYRGSPVPDLENVFGPMESSQTSEDRA
SPRWISFNSERPPPPDEPAPPPPSASPPSDSPHSLSSTPDSPCLSPGPLRMSLPPPHRPS
PLPPDSPISIISIPPPDEPVPPLPPDFSPVDSPPCIGIDPSLFLDDEILGYSPAPSGPLE
YSPAPTSPIPPPLPVERYPRTGVPSPLAFLREEQPDYMASPLGLTPGFRGTPPPLPPLTY
RSMVSSPGPCPGSGPSSPARPSTPLSGGSPIPPPLPTRPSSRPKLPPGKPIGDLTRPFSP
PVXRQPPPFAPLARAESSSSISSITSLSAGSTPTLGRELNISTTEEKQPAMVWFDHGRFY
LSFEGCSRGPSPLTMGAQDTLPVAAAFTETINAYFKGADPSKCVVKITGEMVLSFPAGIT
RHFASHPSAPVLTFSISNYSRLEQVLPNPQLLCCDTTMSNVDTKEFWVNMPNLMSHLRRV
ADQKPQATYYNVDMIKYQVAADGIQSTPLNLAVSWRGDATSTDLRIDYKYNMEAMAAPSP
LHNIHFLVPVDGGVHKLQAMIPTATWKPEQQKILWKIPSLSQRSENGGVGALLGRFQLTE
GPSKPSQLAVHFTSEGSTLSGCDIQLVGTGYRLSLVKKRFAAGKYLADN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggactgaaaaaacgtaccagaaaggcctttgggttacgaaagaaagagaag
gatacagatttcatgggctcacctgacaaagatggagtaagtgcgagaaagaaaaagacc
aacggggctccaaatggctattatggggagattgattgggatcgatatgcaactccagat
gtggatgctgagggcttcagtctcagacccggagaagaagaggaaacaggtcccaaaggc
aagcagcacttcttgtcctccagcgactcggaggacgaggacgacaagaggaagttcaag
atcaagatcaagccgttgccttccgacactgccaagtgtgccgtcccatctatggacgaa
ctgaaagcttcagttgggggcttggctctatctccctctctgaggagaagtccgagacgc
agcccgggctcgataaagagacacctgtcttgtgaggagattgccagacccagacgctcc
acccctacgccaagccccgcccccgagacacaaagtgagagagtatccaagagtcgcaga
gcatctccagctttctacgggcttcctccggagacgacctctgaggcacgcagatatgat
agtaacagaaatgatggtgaagagattgccagacccatacgctccacccttacgccaagc
cccgccctcgggacacaaagtgagagagtatcccagagtcgcagagcatccccagctttc
tacgggcttcctccggagacgacctatgagacacacagatatgacagtaacagaaatgat
gtggtctgcatagaggccgatgcatggtgtgactccagaccataccctgactcccttctg
accagatcctttcccacaggagctcctcctccactgcctcccaagaacatcccagcagct
agtcaaggctattctttgacggattcttacgctgatttacccaatgggagaatagtccca
agccccaaccctatctacctgaatgtccaatccccagcctcgtacagaggttcccctgtg
cctgacctggaaaacgtattcggccccatggaatcttcccagaccagtgaggacagggcc
tcgccccgatggatcagcttcaacagcgagagaccgcccccaccagatgaaccggccccg
cctccgccctctgcctctcctccttccgactcgccccactccctctcctccaccccagac
tccccctgcctctccccgggccccctccggatgagcctcccccctccccaccgcccttct
cctctcccccccgactctcccatctccattatctctattcctcctccagatgaacccgtt
cctcccctgcctcccgacttctctcccgtggactctccgccatgcatcggcatcgatcct
agtctgtttttggatgatgagatactggggtactcccctgctccctctggcccactggag
tactcccctgcccctaccagtcccatccctccccccctgcctgtggagcgctaccctcgg
acgggtgtcccttcccctctggcgttcctgagggaagagcagcctgactatatggcctca
ccccttgggctgaccccgggcttcaggggcacgccgcccccactccccccactcacctac
aggtccatggtatcctcccctggaccctgcccaggcagcggcccctcctctccagctcgt
ccttccacgcccctgtcaggaggcagtccaatccctccccctcttcctacaaggccctcc
tctcgacccaaactgccccctgggaaaccaataggagacctgactcgacccttcagcccc
ccagtcntccggcagccccctcccttcgcccccctggcccgggccgagagttcctcctca
atctcctccatcacctcattgagcgcaggctccacccccaccctggggagagaactcaac
atatccaccacagaggaaaaacagccagccatggtatggtttgaccatggccggttttat
ttgtctttcgaaggatgctccagaggacccagcccactcaccatgggagcccaggacact
ctgcctgtggcggctgccttcaccgagaccatcaacgcctacttcaaaggagccgacccc
agcaagtgtgtggtaaagatcactggggagatggtgctgtctttccctgcgggcatcacc
aggcactttgctagccacccgtctgcccccgtgctcaccttcagcatcagcaactacagc
cggcttgagcaggtcctccccaatccacagctactgtgctgtgacaccaccatgtccaat
gtggacaccaaggaattctgggtaaatatgccaaacctgatgagccacctgaggagagtg
gctgaccagaagcctcaagcaacctactacaatgtggacatgatcaaatatcaggtggca
gccgatgggatccagtcgactcccctgaacctggcagtgagttggcgtggcgacgccacc
agcacggatctcaggatagactacaaatacaacatggaagccatggccgccccctcaccc
ctccacaacatccacttcctggtccctgtggacgggggcgtgcacaagcttcaagccatg
atccccactgctacctggaaaccagagcagcagaaaattctatggaagataccaagcctt
tcccagaggtctgaaaatggaggagtgggggctctactgggtaggttccagttgacagag
ggtcccagtaagccgtcccagttggcggtgcatttcaccagcgagggcagcactctgtca
ggctgtgacatccagctggtggggactggctacaggctctcgctggtcaaaaagagattt
gcagcagggaaatatctggcggacaactag
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