Oncorhynchus tshawytscha (Chinook salmon): 112260238
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Entry
112260238 CDS
T05605
Name
(RefSeq) arf-GAP domain and FG repeat-containing protein 1 isoform X1
KO
K15044
Arf-GAP domain and FG repeats-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112260238
04131 Membrane trafficking [BR:
otw04131
]
112260238
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112260238
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112260238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
112260238
NCBI-ProteinID:
XP_024290945
LinkDB
All DBs
Position
LG10:complement(42253865..42263160)
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AA seq
464 aa
AA seq
DB search
MATSAKRKQEETHLKMLREMTSQPPNRKCFDCDQRGPTYANMTVGSFVCTTCSGILRGLN
PPHRVKSISMTTFTQPEIEFLQKHTNEVCKHIWLGLYNDRTLVVPDFHEPQKVKEFLQEK
YEKKRWYVSPDQARTVATAQASKSASSTGSTPEVQPLRTLQLNKTPPTRQSPVVVRSQAY
PIVQEKKFDLLSDLGGDIFATPPSQAASNSNFANFAHFPSQSATQVSSNADFANFEAFGN
SGVPSHFSTSPPSQSFASGRGVPVPSVAGAVPAPSQLGTSAEDRYAALAELDNELSSSAP
TGSSVQGNMFGAVLGTSPAQTQSVLPSMHVQQGFGAIPSNNPFVAAAPDMATNPFQTNAS
FGTGSMSMPAGFGNPSSYCLPTSFSGTFQQPFPGQAPCPYTQPGAYHPQQPNGPGGYPVY
GQTKPSMTPFGQPMAGPGMTNNPFMAGAPAGSYPAGGSSTNPFL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagtgcgaagcgaaagcaagaggagacgcatctcaagatgcttcgggaaatg
actagccaacccccgaataggaagtgctttgattgcgaccagcgcggcccgacttatgcc
aacatgacagtgggttccttcgtctgtaccacctgttctggcatcttacgagggctgaat
cccccccacagagtgaagtccatctctatgaccaccttcacgcaaccggaaatcgaattc
ctacagaaacacaccaacgaggtttgtaaacacatctggttggggctgtacaatgaccgg
acattggttgttccagacttccacgaaccacagaaagtaaaagaattcctccaggaaaag
tatgagaaaaaaagatggtacgtctctccagaccaggctagaacggtagccactgcccag
gcttccaagtcggccagcagcacaggcagcaccccggaggtccagcccctgagaaccctg
cagcttaacaagacccccccaacgcgtcagtcgccggtggtggttcgctcccaggcctat
cctatagttcaggagaagaagtttgacctcctatctgacctgggtggagacatctttgcc
actccgccctctcaggctgccagcaactccaactttgccaactttgcacatttcccgagc
cagtcagcgactcaggttagctcaaacgccgactttgccaactttgaggcgtttggcaac
tctggagtaccttcacatttcagcacctcacccccctcacagtcctttgcatcagggcga
ggtgtcccagtgccgtcggtggccggcgctgtaccggctccttcccagctgggcacttca
gcagaggaccgctacgctgctcttgctgagctggacaacgagctgagctcttcggccccc
acagggagcagtgtccaggggaatatgtttggagctgtgttgggaacctcgcctgcccag
actcagtcagtattacccagcatgcatgtgcagcaaggctttggagccatcccgtccaat
aatccatttgttgccgccgccccggatatggccaccaaccccttccagactaatgcctcg
tttggcacaggctctatgagtatgcctgctggctttgggaacccctcctcttactgcctc
ccgactagtttcagtgggaccttccagcagcccttccctggccaggccccttgcccttac
acccagccgggggcctaccacccccagcaacccaacggccctggtggatacccagtctac
gggcagaccaagccctccatgaccccctttgggcagcccatggctgggccggggatgacc
aataacccattcatggcgggagccccggctggatcctaccccgctggaggctcttccacc
aaccccttcctgtag
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