KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112260288
Entry
112260288         CDS       T05605                                 
Name
(RefSeq) lysine-specific demethylase 4A-like
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112260288
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     112260288
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     112260288
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112260288
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H PHD Tudor_5
Other DBs
NCBI-GeneID: 112260288
NCBI-ProteinID: XP_042184550
LinkDB
Position
LG10:complement(45891528..45927893)
AA seq 1192 aa
MASDSGPQAPGSKGIMTFHPTAEEFQNFSRYIAYMESQGAHKAGLAKIVPPKDWKPRKSY
DDIDDLVIPAPIQQVVTGQSGLFTQYNIQKKPMTVREFRKTANSDKFCSPRYTDFEELER
KYWKNVTFNPPIYGADVNGTLYDPDVTDWNIGKLSTILDTVEHESGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGAPKSWYCVPPEHGKRMERLAQGFFPGSHQNCEAFLR
HKMTLISPSILRKYGIPFEKITQEPGEFMVTFPYSYHAGFNHGYNCAESTNFATERWIEY
GKRAILCSCRKDMVKISMDLFVKKYQPERYEQWLAGRDTGSIDHSRPTPEAKEFLGEEEG
RCSPSHEPCVEELNTEGERKSPTQRIGTKRHRVCLDVPDEVVPKDEEEEYGKKARLGLTT
QVTGAEECKDTVTLMDLPNVKTDPMQGNRSRSTTPQKVTIPSISNHATAILAQPQSHRNR
HLPVVAPPARTGPSTQTIRKLGVASLLFHKTQSPKEALQGHSYARENQQQIHHTHLHVHS
YAREHLPRHLQPHLQLKAKPQAQVKAEQQESHVPSTKGEQNQADAQIPCKGEPVETKAQT
QGLGKWRQHPGEAQAWEERSEARSPSSPEPVQTQAHTRAAKRVEAEVRRDRRKQCLSPVQ
AEVTLMKQTNVRPSKPTILRPSKLTNLSPSKQTDSSSSKETYSSQSKQTECKSMKSKPHP
LLRKLPKQHPLLRPRESSSDDDELYVNMEDEPEETEEWAKPLAKLWQSRPYNPQAEREYN
QLMGLQAPYCSICLLFHTYDQSESSGNPSYTLKGRRGGRQRSKPLIPEMCFSTTNDKTNN
SSNSGEGQLSTPHLEEDGTSLLVSCSQCCVRVHASCYGVSADQVSDEWMCARCEANALTE
DCCLCSLRGGALQRANNDKWVHVLCALAVLEARFVNIAHRNPVDLSYIPLARFQLKCFYC
KRRVKRDVGCCVQCSHGRCTTAIHPTCAQAAGQLMQPDDWPFIVHVTCYRHKSPVLPERN
KAAMRELEVGQNVICKHKNGRYYQCEVLELTIATFYEVVFDDGSYSDNLFPEDIENRDCV
KLGPPTVGDVVQVRWTDNLLYGAKFVASHSIPMYQMEFEDGSSLSAKREEVYSLDEELPK
RVKSRMSKASDMRFDGIFTEKEVKQGSKRQRVINSRYREDYIEPLIYRAIME
NT seq 3579 nt   +upstreamnt  +downstreamnt
atggcatccgattcggggcctcaggctcccggctccaaagggatcatgacctttcacccc
accgctgaggagttccagaacttcagccgctacattgcctacatggagtcccagggagca
cacaaagccggcctggcaaaaatcgtgccaccaaaggattggaaacccaggaagtcctat
gacgatatagatgacctggtgatcccagctcccatccagcaggtagtgacgggccagtca
ggtctgttcacccagtacaacatccagaagaagcccatgaccgtccgagagttccgcaag
acggccaacagcgacaagttctgcagtcctcgctataccgactttgaagagctggagagg
aagtactggaagaatgtgacttttaacccgcccatctacggggctgatgtaaacggaacg
ctctatgaccccgatgtgaccgattggaacatcggcaaactgagcaccatcctggacacg
gtggagcacgagagtggcatcaccatcgagggggtgaacacgccctacctgtactttggc
atgtggaagaccacctttgcctggcacaccgaagacatggatctctacagtatcaactac
ctccactttggagcgcccaagtcctggtactgcgttcctccagagcatgggaaaagaatg
gagcgcttggctcaagggtttttccctggaagccaccaaaattgcgaagccttcctgagg
cacaagatgaccctcatctctccctccatattgaggaaatatggcattccatttgagaag
atcactcaggagccaggtgaattcatggtgacgtttccctacagctaccatgccggcttt
aaccacggctataactgtgcagagtccactaactttgccactgaaagatggattgagtat
ggaaagcgagccatactgtgttcatgcaggaaggacatggtgaagatctccatggacctg
tttgtgaagaagtaccagccggaacgctacgagcagtggctggcgggtcgggacacgggg
tccattgaccactcacgacccaccccagaggccaaggagttcctaggggaggaggagggg
agatgcagtccttcccatgagccctgtgtggaggagctcaacacggagggggagagaaag
agccccacacagaggatagggaccaagaggcacagagtgtgtctggatgtacctgacgag
gtggtccctaaagatgaggaagaggagtatggaaagaaagccagacttggcctcaccact
caggtcacaggagcagaggagtgcaaagatacagtcaccttgatggacctccctaatgta
aagacggacccaatgcagggcaaccgcagcagaagcactactccgcaaaaagtcaccatc
ccctccatcagcaatcatgcgacggccattttggctcaaccccagtcgcacagaaacagg
caccttccagtagtggctcctccagccaggaccggcccctccacccagacgatcagaaag
ctaggggtggccagcctgctctttcataagacccagagccctaaggaggccctgcagggc
cacagctacgcccgtgagaaccagcagcagattcaccacacccacctccatgtgcacagt
tatgccagggagcacctgccacggcacctccaaccccacctccaactcaaggccaagccc
caggcccaagtcaaggccgagcagcaggagtcccacgtcccatctaccaaaggagagcag
aaccaggccgacgcacagattccctgtaagggagaaccggttgaaaccaaagcccagact
caaggcctcggtaagtggcggcagcatcctggcgaggcccaggcttgggaggagaggtcc
gaagccaggtcccctagcagtccagagcctgtccagacccaagcacacaccagggctgcc
aagagggtcgaggcggaggtccgaagggacaggcggaagcaatgtctttcccctgtgcag
gcggaggtaactttaatgaagcagacaaacgtacgtccaagtaagccgacgatcttacgt
ccaagtaagctgacaaacttaagtccaagtaagcagacggactcaagttcaagtaaggag
acgtattccagtcagagtaagcagacggaatgcaagagcatgaagagcaaaccgcatcct
ctcctccgcaagctgcccaaacagcacccactactcaggcccagggaaagctctagtgat
gacgatgagctgtatgtgaatatggaggatgaaccagaggagacggaggagtgggccaag
ccccttgccaagctctggcagagtagaccctacaacccccaggcggagagggaatacaac
caactcatgggcctgcaggccccctactgctccatctgcctgcttttccacacatatgac
cagtcggagtctagcggcaaccccagctacactctaaaaggccggcgagggggcagacag
aggtccaagcccctgatcccggagatgtgtttcagcaccaccaatgacaagaccaacaac
agcagcaacagcggcgagggccaactttccacccctcacctggaggaggacggtaccagc
ctcctggtcagctgctcccagtgctgtgtccgtgttcacgccagttgctatggagtttct
gcagaccaagtgtcagatgagtggatgtgtgcccgctgtgaggccaacgctttaactgag
gactgctgcctgtgctcactgcgagggggagctctacagagagccaacaatgacaagtgg
gtgcacgtgctgtgtgcgctcgcggtcctggaggcgcggttcgtgaatatcgcccaccgc
aatcccgtggacctcagctacatccctctggccaggttccaactgaagtgtttctactgt
aagcgccgggtgaagagggacgtgggctgttgtgtgcagtgttcccatggccgctgcacc
accgccatccaccccacctgcgcccaggctgctggccagctcatgcagcctgacgactgg
cccttcatcgtccacgtcacctgctacaggcacaagtcacctgtcctgccggagcgcaat
aaggcggccatgcgagagctagaggttggccagaatgttatctgtaagcacaaaaatggc
cgctactaccagtgtgaggtgctggagctgaccatcgccaccttctacgaggttgtcttc
gatgacggctcctacagcgacaacctcttcccagaggacattgagaatcgggactgcgtg
aagctgggcccgccaacagtgggcgacgtagtgcaggtgcgctggaccgacaacctgctt
tacggggccaagtttgtcgcgtcgcactccatccctatgtaccagatggagtttgaggac
gggtcgtcgctgtctgccaagagggaagaagtctacagtctagacgaggagctgcccaaa
cgagtcaagtcccggatgtccaaggcatcagacatgcgcttcgacgggatcttcacggag
aaggaggtgaagcagggctccaaaagacagcgagtcatcaactcccgttacagagaggac
tatatcgagcctctcatatacagagctatcatggaataa

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